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View Structure Prediction Details

Protein: MINE_BUCAP
Organism: Buchnera aphidicola (Schizaphis graminum)
Length: 83 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MINE_BUCAP.

Description E-value Query
Range
Subject
Range
gi|88820533, gi|... - gi|88857336|ref|ZP_01131979.1| cell division topological specificity factor [Pseudoalteromonas tunic...
132.0 [0..1] [83..1]
MINE_PECAS - Cell division topological specificity factor OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC...
MINE_ERWCT - Cell division topological specificity factor OS=Erwinia carotovora subsp. atroseptica GN=minE PE=3 S...
131.0 [0..1] [83..1]
gi|95109614 - gi|95109614|emb|CAK14315.1| cell division topological specificity factor MinE [Pseudomonas entomophi...
MINE_PSEE4 - Cell division topological specificity factor OS=Pseudomonas entomophila (strain L48) GN=minE PE=3 SV...
131.0 [0..1] [83..1]
MINE_HAHCH - Cell division topological specificity factor OS=Hahella chejuensis (strain KCTC 2396) GN=minE PE=3 S...
129.0 [0..1] [83..1]
MINE_PSEHT - Cell division topological specificity factor OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=m...
129.0 [0..1] [83..1]
tr|I7B9M4|I7B9M4... - Cell division topological specificity factor OS=Pseudomonas putida (strain DOT-T1E) GN=minE PE=3 SV=...
MINE_PSEP1 - Cell division topological specificity factor OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=minE...
MINE_PSEPK - Cell division topological specificity factor OS=Pseudomonas putida (strain KT2440) GN=minE PE=3 SV=1
tr|E4REQ1|E4REQ1... - Cell division topological specificity factor OS=Pseudomonas putida (strain BIRD-1) GN=minE PE=3 SV=1
MINE_PSEPG - Cell division topological specificity factor OS=Pseudomonas putida (strain GB-1) GN=minE PE=3 SV=1
129.0 [0..1] [83..1]
gi|49082426 - gi|49082426|gb|AAT50613.1| PA3245 [synthetic construct]
128.0 [0..1] [83..1]
MINE_SHEDO - Cell division topological specificity factor OS=Shewanella denitrificans (strain OS217 / ATCC BAA-10...
128.0 [0..1] [83..1]
MINE_PSEPF - Cell division topological specificity factor OS=Pseudomonas fluorescens (strain Pf0-1) GN=minE PE=3 ...
128.0 [0..1] [83..1]
MINE_PHOLL - Cell division topological specificity factor OS=Photorhabdus luminescens subsp. laumondii (strain DS...
MINE_PHOLL - Cell division topological specificity factor OS=Photorhabdus luminescens subsp. laumondii GN=minE PE...
128.0 [0..1] [83..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLDFFLSR NKNTAHVAKE RLQIIVAEQR KFKSEPDYLP QLKREILSVI CKYVNIDPHM  60
   61 VTIQLEQKNE DISVLELNII LPD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 50.769551
Match: PF03776.5
Description: No description for PF03776.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.819 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.819 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.795 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.782 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.774 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.693 N/A N/A d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
View Download 0.691 N/A N/A d.68.1 Translation initiation factor IF3, C-terminal domain
View Download 0.644 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins


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