YRC Public Data Repository - Protein Structure Prediction

Protein:	MINC_CLOAB
Organism:	Clostridium acetobutylicum
Length:	211 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MINC_CLOAB.

Description	E-value	Query Range	Subject Range
MINC_CLOTE - Probable septum site-determining protein MinC OS=Clostridium tetani (strain Massachusetts / E88) GN=... MINC_CLOTE - Probable septum site-determining protein MinC OS=Clostridium tetani GN=minC PE=3 SV=1	256.0	[0..1]	[209..1]
gi\|170713040, gi... - gi\|170713040\|gb\|EDT25222.1\| septum site-determining protein MinC [Clostridium perfringens B str. ATC... MINC_CLOP1 - Probable septum site-determining protein MinC OS=Clostridium perfringens (strain ATCC 13124 / DSM 75... gi\|170662899, gi... - gi\|170662899\|gb\|EDT15582.1\| septum site-determining protein MinC [Clostridium perfringens E str. JGS... MINC_CLOPE - Probable septum site-determining protein MinC OS=Clostridium perfringens (strain 13 / Type A) GN=min... gi\|182624020, gi... - gi\|182624020\|ref\|ZP_02951808.1\| septum site-determining protein MinC [Clostridium perfringens D str.... gi\|169297696, gi... - gi\|169344237\|ref\|ZP_02865219.1\| septum site-determining protein MinC [Clostridium perfringens C str.... MINC_CLOPS - Probable septum site-determining protein MinC OS=Clostridium perfringens (strain SM101 / Type A) GN=... gi\|168215766, gi... - gi\|182382080\|gb\|EDT79559.1\| septum site-determining protein MinC [Clostridium perfringens NCTC 8239]... gi\|170715552, gi... - gi\|170715552\|gb\|EDT27734.1\| septum site-determining protein MinC [Clostridium perfringens CPE str. F... MINC_CLOPE - Probable septum site-determining protein MinC OS=Clostridium perfringens GN=minC PE=3 SV=1	245.0	[0..1]	[210..1]
MINC_CLOTH - Probable septum site-determining protein MinC OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1...	209.0	[0..1]	[208..1]
MINC_YERPY - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis serotype O:3 (strain YP... gi\|167424792, gi... - gi\|167424792\|ref\|ZP_02316545.1\| septum site-determining protein MinC [Yersinia pestis biovar Mediaev... MINC_YERPB - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis serotype IB (strain PB1... MINC_YERPG - Probable septum site-determining protein MinC OS=Yersinia pestis bv. Antiqua (strain Angola) GN=minC... MINC_YERP3 - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis serotype O:1b (strain I... gi\|149365993, gi... - gi\|149365993\|ref\|ZP_01888028.1\| cell division inhibitor [Yersinia pestis CA88-4125], gi\|149292406\|gb... MINC_YERPS - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis GN=minC PE=3 SV=1 MINC_YERPP - Probable septum site-determining protein MinC OS=Yersinia pestis (strain Pestoides F) GN=minC PE=3 S... gi\|229702267, gi... - gi\|229894794\|ref\|ZP_04509974.1\| cell division inhibitor [Yersinia pestis Pestoides A], gi\|229702267\|... gi\|229897499, gi... - gi\|229897499\|ref\|ZP_04512655.1\| cell division inhibitor [Yersinia pestis biovar Orientalis str. PEXU... gi\|165919637, gi... - gi\|165928354\|ref\|ZP_02224186.1\| septum site-determining protein MinC [Yersinia pestis biovar Orienta... gi\|229898143, gi... - gi\|229898143\|ref\|ZP_04513292.1\| cell division inhibitor [Yersinia pestis biovar Orientalis str. Indi... gi\|166210547, gi... - gi\|166210547\|ref\|ZP_02236582.1\| septum site-determining protein MinC [Yersinia pestis biovar Antiqua... gi\|165991851, gi... - gi\|166009296\|ref\|ZP_02230194.1\| septum site-determining protein MinC [Yersinia pestis biovar Antiqua... gi\|167420262, gi... - gi\|167420262\|ref\|ZP_02312015.1\| septum site-determining protein MinC [Yersinia pestis biovar Orienta... gi\|167401387, gi... - gi\|167401387\|ref\|ZP_02306884.1\| septum site-determining protein MinC [Yersinia pestis biovar Antiqua... MINC_YERPE - Septum site-determining protein MinC OS=Yersinia pestis GN=minC PE=3 SV=1 gi\|45441723, gi\|... - gi\|45441723\|ref\|NP_993262.1\| septum formation inhibitor [Yersinia pestis biovar Microtus str. 91001]... gi\|21959077, gi\|... - gi\|22126118\|ref\|NP_669541.1\| septum formation inhibitor [Yersinia pestis KIM], gi\|21959077\|gb\|AAM857... gi\|218929185, gi... - gi\|218929185\|ref\|YP_002347060.1\| septum formation inhibitor [Yersinia pestis CO92], gi\|16122317\|ref\|... MINC_YERPS - Probable septum site-determining protein MinC OS=Yersinia pseudotuberculosis serotype I (strain IP32... MINC_YERPA - Probable septum site-determining protein MinC OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=min... MINC_YERPN - Probable septum site-determining protein MinC OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mi...	208.0	[0..1]	[204..1]
gi\|238723409, gi... - gi\|77973551\|ref\|ZP_00829098.1\| COG0850: Septum formation inhibitor [Yersinia frederiksenii ATCC 3364...	206.0	[0..1]	[204..1]
gi\|238794479, gi... - gi\|77977704\|ref\|ZP_00833146.1\| COG0850: Septum formation inhibitor [Yersinia intermedia ATCC 29909],...	205.0	[0..1]	[204..1]
gi\|238782533, gi... - gi\|77959238\|ref\|ZP_00823260.1\| COG0850: Septum formation inhibitor [Yersinia bercovieri ATCC 43970],...	204.0	[0..1]	[204..1]
gi\|168241406, gi... - gi\|205339378\|gb\|EDZ26142.1\| septum site-determining protein MinC [Salmonella enterica subsp. enteric... gi\|168259949, gi... - gi\|205351032\|gb\|EDZ37663.1\| septum site-determining protein MinC [Salmonella enterica subsp. enteric... gi\|168462694, gi... - gi\|195633974\|gb\|EDX52326.1\| septum site-determining protein MinC [Salmonella enterica subsp. enteric... gi\|168820563, gi... - gi\|205342617\|gb\|EDZ29381.1\| septum site-determining protein MinC [Salmonella enterica subsp. enteric... gi\|205328658, gi... - gi\|205328658\|gb\|EDZ15422.1\| septum site-determining protein MinC [Salmonella enterica subsp. enteric... gi\|168237879, gi... - gi\|197289201\|gb\|EDY28568.1\| septum site-determining protein MinC [Salmonella enterica subsp. enteric... gi\|213648381 - gi\|213648381\|ref\|ZP_03378434.1\| septum formation inhibitor [Salmonella enterica subsp. enterica sero... gi\|214002611 - gi\|214002611\|ref\|ZP_03413346.1\| septum formation inhibitor [Salmonella enterica subsp. enterica sero... lcl\|NC_016856.1_... - [gene=minC] [protein=septum formation inhibitor] [protein_id=YP_005237752.1] [location=1922776..1923... MINC_SALPC - Probable septum site-determining protein MinC OS=Salmonella paratyphi C (strain RKS4594) GN=minC PE=... MINC_SALTY - Septum site-determining protein MinC OS=Salmonella typhimurium GN=minC PE=1 SV=1 MINC_SALPB - Probable septum site-determining protein minC OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7... gi\|200390288, gi... - gi\|200390288\|ref\|ZP_03216899.1\| septum site-determining protein MinC [Salmonella enterica subsp. ent... MINC_SALPA - Probable septum site-determining protein MinC OS=Salmonella paratyphi A GN=minC PE=3 SV=1 MINC_SALG2 - Probable septum site-determining protein MinC OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) ... MINC_SALCH - Probable septum site-determining protein minC OS=Salmonella choleraesuis GN=minC PE=3 SV=1 gi\|213052597 - gi\|213052597\|ref\|ZP_03345475.1\| septum formation inhibitor [Salmonella enterica subsp. enterica sero... MINC_SALCH - Probable septum site-determining protein MinC OS=Salmonella choleraesuis (strain SC-B67) GN=minC PE=... gi\|213426612 - gi\|213426612\|ref\|ZP_03359362.1\| septum formation inhibitor [Salmonella enterica subsp. enterica sero... MINC_SALA4 - Probable septum site-determining protein MinC OS=Salmonella agona (strain SL483) GN=minC PE=3 SV=1 gi\|197265278, gi... - gi\|197265278\|ref\|ZP_03165352.1\| septum site-determining protein MinC [Salmonella enterica subsp. ent... MINC_SALCH - Probable septum site-determining protein MinC OS=Salmonella choleraesuis GN=minC PE=3 SV=1 MINC_SALPK - Probable septum site-determining protein MinC OS=Salmonella paratyphi A (strain AKU_12601) GN=minC P... MINC_SALDC - Probable septum site-determining protein MinC OS=Salmonella dublin (strain CT_02021853) GN=minC PE=3... MINC_SALNS - Probable septum site-determining protein MinC OS=Salmonella newport (strain SL254) GN=minC PE=3 SV=1 MINC_SALHS - Probable septum site-determining protein MinC OS=Salmonella heidelberg (strain SL476) GN=minC PE=3 S... gi\|194468584, gi... - gi\|194468584\|ref\|ZP_03074568.1\| septum site-determining protein MinC [Salmonella enterica subsp. ent... MINC_SALSV - Probable septum site-determining protein MinC OS=Salmonella schwarzengrund (strain CVM19633) GN=minC... MINC_SALPB - Probable septum site-determining protein MinC OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7... MINC_SALTI - Septum site-determining protein minC OS=Salmonella typhi GN=minC PE=3 SV=1 MINC_SALTY - Septum site-determining protein minC OS=Salmonella typhimurium GN=minC PE=3 SV=1 gi\|16760704 - gi\|16760704\|ref\|NP_456321.1\| septum formation inhibitor [Salmonella enterica subsp. enterica serovar... gi\|238912121 - gi\|238912121\|ref\|ZP_04655958.1\| septum formation inhibitor [Salmonella enterica subsp. enterica sero... MINC_SALPA - Probable septum site-determining protein MinC OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) ... MINC_SALTY - Septum site-determining protein MinC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)... gi\|29137165, gi\|... - gi\|29141538\|ref\|NP_804880.1\| septum formation inhibitor [Salmonella enterica subsp. enterica serovar... MINC_SALTI - Septum site-determining protein MinC OS=Salmonella typhi GN=minC PE=3 SV=1	204.0	[0..1]	[204..1]
gi\|77962229, gi\|... - gi\|77962229\|ref\|ZP_00826052.1\| COG0850: Septum formation inhibitor [Yersinia mollaretii ATCC 43969],...	204.0	[0..1]	[204..1]
MINC_VIBCH - Probable septum site-determining protein MinC OS=Vibrio cholerae GN=minC PE=3 SV=1 MINC_VIBCH - Probable septum site-determining protein MinC OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El... gi\|75830767, gi\|... - gi\|75830767\|ref\|ZP_00760039.1\| COG0850: Septum formation inhibitor [Vibrio cholerae MO10], gi\|254849... gi\|121590651, gi... - gi\|121590651\|ref\|ZP_01677985.1\| septum site-determining protein MinC [Vibrio cholerae 2740-80], gi\|1... gi\|229351779, gi... - gi\|229511814\|ref\|ZP_04401293.1\| septum site-determining protein MinC [Vibrio cholerae B33], gi\|22935... MINC_VIBCM - Probable septum site-determining protein MinC OS=Vibrio cholerae serotype O1 (strain M66-2) GN=minC ... MINC_VIBC3 - Probable septum site-determining protein MinC OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Cl... gi\|229355455, gi... - gi\|229507950\|ref\|ZP_04397455.1\| septum site-determining protein MinC [Vibrio cholerae BX 330286], gi... gi\|229518951, gi... - gi\|229518951\|ref\|ZP_04408394.1\| septum site-determining protein MinC [Vibrio cholerae RC9], gi\|22934... gi\|229370150, gi... - gi\|229607495\|ref\|YP_002878143.1\| septum site-determining protein MinC [Vibrio cholerae MJ-1236], gi\|...	202.0	[0..1]	[204..1]

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Predicted Domain #1

Region A:
Residues: [1-211]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRDGITIKG NKEGLNVIIN INSFKDFDEM LDAFIAKLSK GKRFYKGCTL RITTQLKEIN  60
   61 ERNTRKLKDI LFDEFLIKDC IFEDSDENKS KVFSGIYEGR TKFLRRTVRS GQIIKYSGNV 120
  121 VIVGDVNPGS EIYAGGNVIV FGILRGDVHA GSTGNDKAII AALRLQPKIL QIANRISRAP 180
  181 EDDDKPDYPE VARLKGDAII VEPYSPNKFN I

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.30103
Match:	1hf2A
Description:	Cell-division inhibitor MinC, C-terminal domain; Cell-division inhibitor MinC, N-terminal domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits