YRC Public Data Repository - Protein Structure Prediction

Protein:	MFAP_LACKL
Organism:	Lachancea kluyveri
Length:	125 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MFAP_LACKL.

Description	E-value	Query Range	Subject Range
MFA1_SACBA - Mating factor alpha OS=Saccharomyces bayanus PE=4 SV=1 MFA1_SACUV - Mating factor alpha OS=Saccharomyces uvarum PE=4 SV=1	178.0	[0..1]	[125..1]
gi\|127054, gi\|171945 - gi\|171945\|gb\|AAA34778.1\| mating factor alpha, sp\|P25041\|MFAI_YEAST Mating factor alpha precursor (Al...	177.0	[0..1]	[125..1]
gi\|27948829 - gi\|27948829\|gb\|AAO25615.1\| mating pheromone alpha2 [Kluyveromyces delphensis]	165.0	[0..1]	[125..1]
gi\|24940448, gi\|... - gi\|24940450\|emb\|CAD56324.1\| alpha-pheromone [Saccharomyces paradoxus], gi\|24940448\|emb\|CAD56323.1\| a...	158.0	[0..22]	[125..21]

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Predicted Domain #1

Region A:
Residues: [1-125]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFTTLSAS LIFIHSLGST RAAPVTGDES SVEIPEESLI GFLDLAGDDI SVFPVSNETH  60
   61 YGLMLVNSTI VNLARSESAN FKGKREADAE PWHWLSFSKG EPMYKREADA EPWHWLSFSK 120
  121 GEPMY

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	60.376751
Match:	PF05436.2
Description:	No description for PF05436.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits