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View Structure Prediction Details

Protein: MFA1_SACBA
Organism: Saccharomyces bayanus
Length: 144 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MFA1_SACBA.

Description E-value Query
Range
Subject
Range
MFAL1_YEAST - Mating factor alpha-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MF(ALPHA)1 PE=1 SV...
MF(ALPHA)1 - Mating pheromone alpha-factor, made by alpha cells; interacts with mating type a cells to induce cel...
241.0 [0..1] [144..1]
gi|27948829 - gi|27948829|gb|AAO25615.1| mating pheromone alpha2 [Kluyveromyces delphensis]
208.0 [0..1] [144..1]
gi|24940430 - gi|24940430|emb|CAD56314.1| alpha-pheromone [Saccharomyces paradoxus]
203.0 [0..1] [144..1]
gi|50288999, gi|... - gi|50288999|ref|XP_446929.1| unnamed protein product [Candida glabrata], gi|49526238|emb|CAG59862.1|...
gi|49526238, gi|... - gi|49526238|emb|CAG59862.1| unnamed protein product [Candida glabrata], gi|27948823|gb|AAO25610.1| m...
182.0 [0..1] [144..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFPSIFTAV LFAASSALAA PVNTTTEDET AQIPAEAVIG YLDLEGDFDV AVLPFSNSTN  60
   61 NGLLFINTTI ASIAAKEEGV SLDKREAEAW HWLQLKPGQP MYKREADAEA WHWLQLKPGQ 120
  121 PMYKREADAE AWHWLQLKPG QPMY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 61.39794
Match: PF05436.2
Description: No description for PF05436.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle