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View Structure Prediction Details

Protein: hsd-3
Organism: Caenorhabditis elegans
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for hsd-3.

Predicted Domain #1
Region A:
Residues: [1-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPRNHYVIT GGGGFLGAHL IAALQKNGDR TKCIVVDPNP RLSHFSAIDF DKSLVEYEKA  60
   61 QKHREYVYAF NVTGTKFLIE KCKFFGVPRF IYSSSIAVVF VGKPIYNCDE SEPYPLKSEY 120
  121 LDIYSSSKAE AEAFVRSQST IQFKTTCLRF RAIYGPQDVT VAEKVVQMVR KNLFMVKISR 180
  181 HGRESVSNMS SGENCGLALH LANQELSKKE GSHGEVSQIL KVLNVHRFQV YFITDGETVG 240
  241 QYSVWSPLIK ALGKTPPHHF VSCLLVSTFV SLSSYLCYKI FNSSPPMTRF ELEVLITDNT 300
  301 YSIEKARREL GYCPEQNLFE KVNINSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 1g1aA
Description: dTDP-glucose 4,6-dehydratase (RmlB)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle