YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: KPY1_ECOLI, KPYK...
Organism: Escherichia coli
Length: 470 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KPY1_ECOLI, KPYK....

Description E-value Query
Range
Subject
Range
gi|114657936 - gi|114657936|ref|XP_001175096.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
597.0 [0..2] [470..103]
gi|109081748 - gi|109081748|ref|XP_001091427.1| PREDICTED: pyruvate kinase 3 isoform 9 [Macaca mulatta]
596.0 [0..2] [470..103]
gi|82402605, gi|... - gi|82499377|ref|ZP_00884823.1| Pyruvate kinase [Caldicellulosiruptor saccharolyticus DSM 8903], gi|8...
591.0 [0..1] [470..1]
gi|33875497 - gi|33875497|gb|AAH00481.2| PKM2 protein [Homo sapiens]
591.0 [0..2] [470..77]

Back

Predicted Domain #1
Region A:
Residues: [1-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTKIVCTI GPKTESEEML AKMLDAGMNV MRLNFSHGDY AEHGQRIQNL RNVMSKTGKT  60
   61 AAILLDTKGP EIRTMKLEGG NDVSLKAGQT FTFTTDKSVI GNSEMVAVTY EGFTTDLSVG 120
  121 NTVLVDDGLI GMEVTAIEGN KVICKVLNNG DLGENKGVNL PGVSIALPAL AEKDKQDLIF 180
  181 GCEQGVDFVA ASFIRKRSDV IEIREHLKAH GGENIHIISK IENQEGLNNF DEILEASDGI 240
  241 MVARGDLGVE IPVEEVIFAQ KMMIEKCIRA RKVVITATQM LDSMIKNPRP TRAEAGDVAN 300
  301 AILDGTDAVM LSGESAKGKY PLEAVSIMAT ICERTDRVMN SRLEFNNDNR KLRITEAVCR 360
  361 GAVETAEKLD APLIVVATQG GKSARAVRKY FPDATILALT TNEKTAHQLV LSKGVVPQLV 420
  421 KEITSTDDFY RLGKELALQS GLAHKGDVVV MVSGALVPSG TTNTASVHVL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 162.0
Match: 1pkyA
Description: Pyruvate kinase (PK); Pyruvate kinase, N-terminal domain; Pyruvate kinase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
pyruvate kinase activity 5.30539631424432 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 3.74686803828771 bayes_pls_golite062009
kinase activity 3.60311146880852 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 3.2602140947877 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.49386405838309 bayes_pls_golite062009
transferase activity 2.39042747917065 bayes_pls_golite062009
substrate-specific transporter activity 2.35681897894387 bayes_pls_golite062009
hydroxymethyl-, formyl- and related transferase activity 1.41686595651633 bayes_pls_golite062009
binding 1.40856686140554 bayes_pls_golite062009
ADP binding 1.23883289666587 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 1.09759860844913 bayes_pls_golite062009
hydrolase activity 0.962445116339459 bayes_pls_golite062009
catalytic activity 0.932947046865376 bayes_pls_golite062009
phosphoenolpyruvate carboxykinase activity 0.777178963260734 bayes_pls_golite062009
protein binding 0.438735017993357 bayes_pls_golite062009
lyase activity 0.0456521871650777 bayes_pls_golite062009
phosphotransferase activity, paired acceptors 0.0254711315719321 bayes_pls_golite062009
citrate (pro-3S)-lyase activity 0.0039163158887896 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle