YRC Public Data Repository - Protein Structure Prediction

Protein:	KEFF_SHIFL
Organism:	Shigella flexneri
Length:	176 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KEFF_SHIFL.

Description	E-value	Query Range	Subject Range
KEFF_SHISS - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Shigella sonnei (strain Ss04...	175.0	[0..1]	[176..1]
gi\|190905600, gi... - gi\|191174106\|ref\|ZP_03035620.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... KEFF_ECOL5 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O6:K15:H31 ...	175.0	[0..1]	[176..1]
KEFF_ECOLC - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli (strain ATC... gi\|188494854, gi... - gi\|188494854\|ref\|ZP_03002124.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... KEFF_SHIB3 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Shigella boydii serotype 18 ... KEFF_SHIBS - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Shigella boydii serotype 4 (... gi\|124498620, gi... - gi\|124531320\|ref\|ZP_01701648.1\| NAD(P)H dehydrogenase (quinone) [Escherichia coli B], gi\|124498620\|g... gi\|226840569, gi... - gi\|254037463\|ref\|ZP_04871540.1\| glutathione-regulated potassium-efflux system ancillary protein kefF...	175.0	[0..1]	[176..1]
KEFF_SHIDS - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Shigella dysenteriae serotyp...	175.0	[0..1]	[176..1]
KEFF_ECODH - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli (strain K12... KEFF_ECOSM - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli (strain SMS... gi\|170768466, gi... - gi\|170768466\|ref\|ZP_02902919.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... KEFF_ECOHS - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O9:H4 (stra... gi\|193066229, gi... - gi\|193066229\|ref\|ZP_03047282.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... KEFF_ECO24 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O139:H28 (s... gi\|251783612, gi... - gi\|251783612\|ref\|YP_002997916.1\| hypothetical protein B21_00049 [Escherichia coli BL21], gi\|24237588... gi\|253976281, gi... - gi\|254286974\|ref\|YP_003052722.1\| glutathione-regulated potassium-efflux system ancillary protein [Es... gi\|227837884, gi... - gi\|227885055\|ref\|ZP_04002860.1\| CPA2 family monovalent cation:proton (H+) antiporter-2 [Escherichia ... KEFF_ECOBW - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli (strain K12... gi\|254160171, gi... - gi\|254160171\|ref\|YP_003043279.1\| glutathione-regulated potassium-efflux system ancillary protein [Es... KEFF_ECO7I - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O7:K1 (stra... KEFF_ECOLU - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O17:K52:H18... KEFF_ECO27 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O127:H6 (st... KEFF_ECO8A - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O8 (strain ... gi\|85674301, gi\|... - gi\|89106930\|ref\|AP_000710.1\| flavoprotein subunit for the KefC potassium efflux system [Escherichia ... KEFF_ECO81 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O81 (strain... KEFF_ECO55 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli (strain 559... gi\|193070966, gi... - gi\|193070966\|ref\|ZP_03051895.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... gi\|194429883, gi... - gi\|194429883\|ref\|ZP_03062395.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... gi\|194439683, gi... - gi\|194439683\|ref\|ZP_03071753.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... KEFF_ECOSE - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli (strain SE1... EG11568 - potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, F... KEFF_ECOL6 - Glutathione-regulated potassium-efflux system ancillary protein kefF OS=Escherichia coli O6 GN=kefF ... KEFF_ECOL6 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O6:H1 (stra... KEFF_ECOLI - Glutathione-regulated potassium-efflux system ancillary protein kefF - Escherichia coli EG11568 - potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, F... sp\|B7UI92\|KEFF_ECO27 - Glutathione-regulated potassium-efflux system ancillary protein kefF OS=Escherichia coli O127:H6 (st...	175.0	[0..1]	[176..1]
gi\|209746946, gi... - pir\|\|A90635 probable NAD(P)H oxidoreductase ECs0049 [imported] - Escherichia coli (strain O157:H7, s... gi\|15799729, gi\|... - gi\|15799729\|ref\|NP_285741.1\| glutathione-regulated potassium-efflux system ancillary protein KefF [E... gi\|15829303, gi\|... - gi\|15829303\|ref\|NP_308076.1\| glutathione-regulated potassium-efflux system ancillary protein KefF [E... KEFF_ECO57 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O157:H7 GN=... gi\|208740052, gi... - gi\|208819929\|ref\|ZP_03260249.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... KEFF_ECO5E - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O157:H7 (st... gi\|217325022, gi... - gi\|217325022\|ref\|ZP_03441106.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... gi\|189376010, gi... - gi\|189376010\|gb\|EDU94426.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Es... gi\|195937720 - gi\|195937720\|ref\|ZP_03083102.1\| glutathione-regulated potassium-efflux system ancillary protein KefF... gi\|208727749, gi... - gi\|208807948\|ref\|ZP_03250285.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... gi\|208811984, gi... - gi\|208811984\|ref\|ZP_03253313.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... gi\|189364191, gi... - gi\|189364191\|gb\|EDU82610.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Es... gi\|168776966, gi... - gi\|187767732\|gb\|EDU31576.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Es... gi\|254791183, gi... - gi\|254791183\|ref\|YP_003076020.1\| flavoprotein subunit for the KefC potassium efflux system [Escheric... gi\|168781747, gi... - gi\|189000659\|gb\|EDU69645.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Es... gi\|168785101, gi... - gi\|189374872\|gb\|EDU93288.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Es... gi\|168751696, gi... - gi\|188014292\|gb\|EDU52414.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Es... gi\|168756874, gi... - gi\|189356118\|gb\|EDU74537.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Es... gi\|168762810, gi... - gi\|189366963\|gb\|EDU85379.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Es...	174.0	[0..1]	[176..1]
gi\|226902102, gi... - gi\|237704190\|ref\|ZP_04534671.1\| glutathione-regulated potassium-efflux system ancillary protein kefF... KEFF_ECOUT - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli (strain UTI... KEFF_ECOK1 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O1:K1 / APE... KEFF_ECO45 - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Escherichia coli O45:K1 (str...	174.0	[0..1]	[176..1]
gi\|28875440 - gi\|28875440\|gb\|AAO59932.1\| YabF [uncultured bacterium]	168.0	[0..1]	[176..1]
KEFF_SALCH - Glutathione-regulated potassium-efflux system ancillary protein kefF OS=Salmonella choleraesuis GN=k... KEFF_SALPC - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Salmonella paratyphi C (stra... KEFF_SALNS - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Salmonella newport (strain S... gi\|168464372, gi... - gi\|195632724\|gb\|EDX51178.1\| glutathione-regulated potassium-efflux system ancillary protein kefF [Sa... KEFF_SALCH - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Salmonella choleraesuis (str... KEFF_SALCH - Glutathione-regulated potassium-efflux system ancillary protein kefF OS=Salmonella choleraesuis GN=k...	166.0	[0..1]	[176..1]
gi\|213648896 - gi\|213648896\|ref\|ZP_03378949.1\| glutathione-regulated potassium-efflux system ancillary protein KefF... KEFF_SALTI - Glutathione-regulated potassium-efflux system ancillary protein KefF OS=Salmonella typhi GN=kefF PE=... gi\|213864862 - gi\|213864862\|ref\|ZP_03386981.1\| glutathione-regulated potassium-efflux system ancillary protein KefF... gi\|214001253 - gi\|214001253\|ref\|ZP_03411988.1\| glutathione-regulated potassium-efflux system ancillary protein KefF... gi\|29140630, gi\|... - gi\|29140630\|ref\|NP_803972.1\| glutathione-regulated potassium-efflux system ancillary protein KefF [S... gi\|213427528 - gi\|213427528\|ref\|ZP_03360278.1\| glutathione-regulated potassium-efflux system ancillary protein KefF... gi\|16759080 - gi\|16759080\|ref\|NP_454697.1\| glutathione-regulated potassium-efflux system ancillary protein KefF [S... gi\|213579824 - gi\|213579824\|ref\|ZP_03361650.1\| glutathione-regulated potassium-efflux system ancillary protein KefF... KEFF_SALTI - Glutathione-regulated potassium-efflux system ancillary protein kefF OS=Salmonella typhi GN=kefF PE=...	164.0	[0..1]	[176..1]

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Predicted Domain #1

Region A:
Residues: [1-176]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILIIYAHPY PHHSHANKRM LEQARTLEGV EIRSLYQLYP DFNIDIAAEQ EALSRADLIV  60
   61 WQHPMQWYSI PPLLKLWIDK VLSHGWAYGH GGTALHGKHL LWAVTTGGGE SHFEIGAHPG 120
  121 FDVLSQPLQA TAIYCGLNWL PPFAMHCTFI CDDETLEGQA RHYKQRLLEW QEAHHG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.39794
Match:	1qr2A
Description:	Quinone reductase type 2 (menadione reductase)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits