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View Structure Prediction Details

Protein: dyf-5
Organism: Caenorhabditis elegans
Length: 471 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for dyf-5.

Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAVKLADR YLMTKRLGDG TFGEVMLAKK IDTGDRVAIK RMKKKFYSWE EAMSLREVKS  60
   61 LKKLNHPNII KLREVIREND ILYFVFEFMQ ENLYELMKDR DRYFPESVIR NIIYQVLQGL 120
  121 AFMHKNGFFH RDMKPENIMC NGTELVKIAD FGLAREIRSK PPYTDYVSTR WYRAPEILLR 180
  181 STSYNSPIDM WALGCIMAEL YILRPLFPGT SEMDQLFKII SILGTPNKDE WPEGYQLASA 240
  241 MNFRFQQVVA TPMEQVVNTI SKEGMKLMMD MMLWNPEKRP NANQSLRYKY FQVAEKLGAP 300
  301 VVSQPAPGSI RKTSAASVKS DTKAMTAKAA KKDYIGSENV SPQQPA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.221849
Match: 2baqA
Description: p38alpha bound to Ro3201195
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [347-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVIDRHINRN LPLNKETLFE KSDNKPLGPT KSNEAKPTAK EIYLSKSKYV PGQVSKDTHQ  60
   61 NQIMTTNGLT GTTKTTTFSA KKEGRTAVQT RFEYAYGSSF CSSHKSLFLF VFLLPFGACL 120
  121 SSQYS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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