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View Structure Prediction Details

Protein: INS_CYPCA
Organism: Cyprinus carpio
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INS_CYPCA.

Description E-value Query
Range		 Subject
Range
gi|13517219 - gi|13517219|gb|AAK28709.1| preproinsulin [Catostomus commersoni]
 133.0 [0..1] [108..1]
gi|13991923 - gi|13991923|gb|AAK51558.1|AF373021_1 preproinsulin [Catla catla]
 131.0 [0..1] [108..1]
INS_LOPPI - (P01341) Insulin precursor
INS_LOPAM - Insulin OS=Lophius americanus GN=ins PE=3 SV=1
 125.0 [0..2] [108..3]
INS2_XENLA - Insulin-2 OS=Xenopus laevis GN=ins-b PE=1 SV=2
 124.0 [0..1] [108..1]
INS_ORENI - Insulin OS=Oreochromis niloticus GN=ins PE=1 SV=2
 121.0 [0..2] [108..3]
INS_CHICK - Insulin OS=Gallus gallus GN=INS PE=1 SV=1
 120.0 [0..1] [108..1]
INS_VERMO - Insulin OS=Verasper moseri GN=ins PE=3 SV=1
 118.0 [0..2] [108..3]
INS_PANBU - Insulin OS=Pantodon buchholzi GN=ins PE=3 SV=1
 118.0 [0..1] [108..1]
gi|14161273 - gi|14161273|gb|AAK54684.1| preproinsulin [Hiodon alosoides]
 117.0 [0..1] [108..1]

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Predicted Domain #1
Region A:
Residues: [1-108] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVWIQAGAL LFLLAVSSVN ANAGAPQHLC GSHLVDALYL VCGPTGFFYN PKRDVDPPLG  60
   61 FLPPKSAQET EVADFAFKDH AEVIRKRGIV EQCCHKPCSI FELQNYCN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.154902
Match: 1efeA
Description: Insulin
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle