YRC Public Data Repository - Protein Structure Prediction

Protein:	Ilp3-PA
Organism:	Drosophila melanogaster
Length:	120 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ilp3-PA.

Description	E-value	Query Range	Subject Range
gi\|13517219 - gi\|13517219\|gb\|AAK28709.1\| preproinsulin [Catostomus commersoni]	114.0	[0..1]	[115..1]
INS_CYPCA - Insulin OS=Cyprinus carpio GN=ins PE=1 SV=1	113.0	[0..1]	[115..1]
INS_CHICK - Insulin OS=Gallus gallus GN=INS PE=1 SV=1	113.0	[0..1]	[115..1]
gi\|13991923 - gi\|13991923\|gb\|AAK51558.1\|AF373021_1 preproinsulin [Catla catla]	112.0	[0..1]	[115..1]
gi\|73982638 - gi\|73982638\|ref\|XP_863200.1\| PREDICTED: similar to Insulin-like growth factor II precursor (IGF-II) ...	111.0	[0..1]	[120..1]
INS1_RAT - Insulin-1 OS=Rattus norvegicus GN=Ins1 PE=1 SV=1	110.0	[0..1]	[115..1]
INS_LOPPI - (P01341) Insulin precursor INS_LOPAM - Insulin OS=Lophius americanus GN=ins PE=3 SV=1	110.0	[0..2]	[115..3]
gi\|1289271 - gi\|1289271\|emb\|CAA65862.1\| insulin-like growth factor II [Oncorhynchus keta]	110.0	[0..1]	[120..24]
IGF2_ONCMY - Insulin-like growth factor II OS=Oncorhynchus mykiss GN=igf2 PE=2 SV=1	110.0	[0..1]	[120..24]
INS_ORENI - Insulin OS=Oreochromis niloticus GN=ins PE=1 SV=2	110.0	[0..2]	[115..3]

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Predicted Domain #1

Region A:
Residues: [1-120]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIEMRCQDR RILLPSLLLL ILMIGGVQAT MKLCGRKLPE TLSKLCVYGF NAMTKRTLDP  60
   61 VNFNQIDGFE DRSLLERLLS DSSVQMLKTR RLRDGVFDEC CLKSCTMDEV LRYCAAKPRT 120
  121

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.0
Match:	1bqtA
Description:	THREE-DIMENSIONAL STRUCTURE OF HUMAN INSULIN-LIKE GROWTH FACTOR-I (IGF-I) DETERMINED BY 1H-NMR AND DISTANCE GEOMETRY, 6 STRUCTURES
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits