YRC Public Data Repository - Protein Structure Prediction

Protein:	TIM9_ZYGBA
Organism:	Zygosaccharomyces bailii
Length:	87 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIM9_ZYGBA.

Description	E-value	Query Range	Subject Range
gi\|73955150 - gi\|73955150\|ref\|XP_854099.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	97.0	[0..1]	[87..166]
TIM9_ASPFU - Mitochondrial import inner membrane translocase subunit tim9 OS=Aspergillus fumigatus GN=tim9 PE=3 S... TIM9_ASPFU - Mitochondrial import inner membrane translocase subunit tim9 OS=Neosartorya fumigata (strain ATCC MY...	96.0	[0..1]	[86..1]
gi\|50766075 - gi\|50766075\|ref\|XP_422986.1\| PREDICTED: similar to translocase of inner mitochondrial membrane 10 ho...	96.0	[0..1]	[87..118]
TIM9_CANGA - Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida glabrata GN=TIM9 PE=3 SV=1 TIM9_CANGA - Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida glabrata (strain ATCC 2001 /...	94.0	[0..1]	[87..1]
IM09_EMENI, TIM9... - Mitochondrial import inner membrane translocase subunit tim9 OS=Emericella nidulans GN=tim9 PE=3 SV=... TIM9_EMENI - Mitochondrial import inner membrane translocase subunit tim9 OS=Emericella nidulans (strain FGSC A4 ...	94.0	[0..1]	[86..1]
TIM9_ASHGO - Mitochondrial import inner membrane translocase subunit TIM9 OS=Ashbya gossypii (strain ATCC 10895 /... TIM9_ASHGO - Mitochondrial import inner membrane translocase subunit TIM9 OS=Ashbya gossypii GN=TIM9 PE=3 SV=1	92.0	[0..1]	[87..1]
gi\|115433248, gi... - gi\|115433248\|ref\|XP_001216761.1\| mitochondrial import inner membrane translocase subunit tim9 [Asper...	91.0	[0..1]	[86..1]
gi\|190405544 - gi\|190405544\|gb\|EDV08811.1\| mitochondrial import inner membrane translocase subunit TIM9 [Saccharomy... TIM9 - Essential protein of the mitochondrial intermembrane space, forms a complex with Tim10p (TIM10 compl... TIM9_YEAST - Mitochondrial import inner membrane translocase subunit TIM9 OS=Saccharomyces cerevisiae (strain ATC... gi\|151944689 - gi\|151944689\|gb\|EDN62948.1\| translocase of the inner membrane [Saccharomyces cerevisiae YJM789] ORFP:5801 - YEL020W-A, Contig c354 21982-22245 reverse complement Sbay_645.50, Sba... - probable YEL020W-A TIM9 (88536-88799), null	91.0	[0..1]	[87..1]
gi\|67901324, gi\|... - gi\|67901324\|ref\|XP_680918.1\| IM09_EMENI Mitochondrial import inner membrane translocase subunit TIM9... TIM9_EMENI - Mitochondrial import inner membrane translocase subunit tim9 OS=Emericella nidulans GN=tim9 PE=3 SV=...	91.0	[0..1]	[86..1]
gi\|115969099, gi... - gi\|115969099\|ref\|XP_001188197.1\| PREDICTED: similar to small zinc finger-like protein [Strongylocent...	91.0	[0..20]	[85..384]

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Predicted Domain #1

Region A:
Residues: [1-87]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSLNPREQQ EFSKLIEHKQ MKDFMRLYSN LVERCFTDCV NDFTSSKLTS KEQTCISRCS  60
   61 EKFLKHSERV GLRFQEQNAA MGQGLGR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	15.522879
Match:	2bskB
Description:	Crystal structure of the TIM9 Tim10 hexameric complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
protein transporter activity	3.96569591038426	bayes_pls_golite062009
transporter activity	3.42555440535265	bayes_pls_golite062009
protein transmembrane transporter activity	3.05578860381335	bayes_pls_golite062009
P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.52072322460318	bayes_pls_golite062009
macromolecule transmembrane transporter activity	2.52072322460318	bayes_pls_golite062009
binding	2.38169553639759	bayes_pls_golite062009
substrate-specific transporter activity	2.26454691978513	bayes_pls_golite062009
transmembrane transporter activity	2.01475009173074	bayes_pls_golite062009
protein binding	1.54231655177329	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	1.5410808613005	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: