YRC Public Data Repository - Protein Structure Prediction

Protein:	IM09_EMENI, TIM9...
Organism:	Emericella nidulans
Length:	90 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IM09_EMENI, TIM9....

Description	E-value	Query Range	Subject Range
TIM9_ASPFU - Mitochondrial import inner membrane translocase subunit tim9 OS=Aspergillus fumigatus GN=tim9 PE=3 S... TIM9_ASPFU - Mitochondrial import inner membrane translocase subunit tim9 OS=Neosartorya fumigata (strain ATCC MY...	107.0	[0..1]	[90..1]
gi\|67901324, gi\|... - gi\|67901324\|ref\|XP_680918.1\| IM09_EMENI Mitochondrial import inner membrane translocase subunit TIM9... TIM9_EMENI - Mitochondrial import inner membrane translocase subunit tim9 OS=Emericella nidulans GN=tim9 PE=3 SV=...	102.0	[0..1]	[90..1]
gi\|115433248, gi... - gi\|115433248\|ref\|XP_001216761.1\| mitochondrial import inner membrane translocase subunit tim9 [Asper...	101.0	[0..1]	[90..1]
TIM9_ZYGBA - Mitochondrial import inner membrane translocase subunit Tim9 OS=Zygosaccharomyces bailii GN=TIM9 PE=...	100.0	[0..1]	[86..1]
gi\|73955150 - gi\|73955150\|ref\|XP_854099.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	98.0	[0..1]	[83..166]
gi\|111055465, gi... - gi\|169625467\|ref\|XP_001806137.1\| hypothetical protein SNOG_16006 [Phaeosphaeria nodorum SN15], gi\|11...	98.0	[0..1]	[90..1]
TIM9_CANGA - Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida glabrata GN=TIM9 PE=3 SV=1 TIM9_CANGA - Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida glabrata (strain ATCC 2001 /...	97.0	[0..1]	[86..1]
TIM9_ASHGO - Mitochondrial import inner membrane translocase subunit TIM9 OS=Ashbya gossypii (strain ATCC 10895 /... TIM9_ASHGO - Mitochondrial import inner membrane translocase subunit TIM9 OS=Ashbya gossypii GN=TIM9 PE=3 SV=1	94.0	[0..1]	[86..1]
gi\|190405544 - gi\|190405544\|gb\|EDV08811.1\| mitochondrial import inner membrane translocase subunit TIM9 [Saccharomy... TIM9 - Essential protein of the mitochondrial intermembrane space, forms a complex with Tim10p (TIM10 compl... TIM9_YEAST - Mitochondrial import inner membrane translocase subunit TIM9 OS=Saccharomyces cerevisiae (strain ATC... gi\|151944689 - gi\|151944689\|gb\|EDN62948.1\| translocase of the inner membrane [Saccharomyces cerevisiae YJM789] ORFP:5801 - YEL020W-A, Contig c354 21982-22245 reverse complement Sbay_645.50, Sba... - probable YEL020W-A TIM9 (88536-88799), null	94.0	[0..1]	[86..1]
gi\|115969099, gi... - gi\|115969099\|ref\|XP_001188197.1\| PREDICTED: similar to small zinc finger-like protein [Strongylocent...	93.0	[0..20]	[90..384]

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Predicted Domain #1

Region A:
Residues: [1-90]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGLNAAEQR ELANRMERKQ MKEFMTMYSK LVQRCFDDCV NDFTTKSLIS REEGCVMRCV  60
   61 DKFMKGSQRL NERFQEQNAA MMQSGQLPGR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.69897
Match:	2bskA
Description:	Crystal structure of the TIM9 Tim10 hexameric complex
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits