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View Structure Prediction Details

Protein: IL13_BOVIN
Organism: Bos taurus
Length: 132 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IL13_BOVIN.

Description E-value Query
Range		 Subject
Range
IL13_MACMU - Interleukin-13 OS=Macaca mulatta GN=IL13 PE=2 SV=1
 248.0 [0..1] [132..1]
gi|110559067 - gi|110559067|gb|ABG75889.1| IL13 [Macaca fascicularis]
 246.0 [0..1] [132..1]
gi|67944395 - gi|67944395|gb|AAY83833.1| interleukin-13 [Bubalus bubalis]
 242.0 [0..1] [132..1]
IL13 - interleukin 13
HGNC:5973|MIM:14... - 13
gi|61358321 - gi|61358321|gb|AAX41548.1| interleukin 13 [synthetic construct]
 233.0 [0..1] [132..1]
gi|60828039, gi|... - gi|61368425|gb|AAX43177.1| interleukin 13 [synthetic construct], gi|60828039|gb|AAX36825.1| interleu...
 233.0 [0..1] [132..1]
IL13_PIG - Interleukin-13 OS=Sus scrofa GN=IL13 PE=2 SV=1
 232.0 [0..1] [129..1]
IL13_PANTR - Interleukin-13 OS=Pan troglodytes GN=IL13 PE=3 SV=1
 231.0 [0..1] [132..1]

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Predicted Domain #1
Region A:
Residues: [1-132] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLLTAVIV LICFGGLTSP SPVPSATALK ELIEELVNIT QNQKVPLCNG SMVWSLNLTS  60
   61 SMYCAALDSL ISISNCSVIQ RTKKMLNALC PHKPSAKQVS SEYVRDTKIE VAQFLKDLLR 120
  121 HSRIVFRNER FN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.30103
Match: 1ga3A
Description: Interleukin-13 (IL-13)
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle