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View Structure Prediction Details

Protein: IER1_SOLLC
Organism: Solanum lycopersicum
Length: 119 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IER1_SOLLC.

Description E-value Query
Range
Subject
Range
ICI1_SOLPE - Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum PE=3 SV=1
163.0 [0..9] [118..4]
ICID_SOLTU - Wound-induced proteinase inhibitor 1 OS=Solanum tuberosum PE=1 SV=2
154.0 [0..9] [118..4]
gi|124119 - sp|P05118|ICI1_LYCES Wound-induced proteinase inhibitor I precursor
ICI1_SOLLC - Wound-induced proteinase inhibitor 1 OS=Solanum lycopersicum GN=PIIF PE=2 SV=1
154.0 [0..9] [118..4]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANKSMVKL VAFLIILVSS CFQSLTAQDL EIEVSDGLNV LQVHDVSQSF CPGVTKESWP  60
   61 ELLGTPAKFA KQIIQKENPK LTNVETLLNG SAFTEDLRCN RVRLFVNLLD IVVQTPKVG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.69897
Match: 1mitA
Description: RECOMBINANT CUCURBITA MAXIMA TRYPSIN INHIBITOR V (RCMTI-V) (NMR, MINIMIZED AVERAGE STRUCTURE)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle