| Protein: | HYCC_ECOLI |
| Organism: | Escherichia coli |
| Length: | 608 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HYCC_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
348.0 | [0..3] | [463..11] |
|
|
345.0 | [0..3] | [451..19] |
|
|
344.0 | [0..3] | [463..10] |
|
|
343.0 | [0..3] | [458..11] |
|
|
343.0 | [0..3] | [451..16] |
|
|
343.0 | [0..3] | [456..19] |
|
|
343.0 | [0..3] | [458..11] |
|
|
342.0 | [0..2] | [591..10] |
|
|
342.0 | [0..3] | [449..19] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MSAISLINSG VAWFVAAAVL AFLFSFQKAL SGWIAGIGGA VGSLYTAAAG FTVLTGAVGV 60
61 SGALSLVSYD VQISPLNAIW LITLGLCGLF VSLYNIDWHR HAQVKCNGLQ INMLMAAAVC 120
121 AVIASNLGMF VVMAEIMALC AVFLTSNSKE GKLWFALGRL GTLLLAIACW LLWQRYGTLD 180
181 LRLLDMRMQQ LPLGSDIWLL GVIGFGLLAG IIPLHGWVPQ AH
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [223-524] |
1 11 21 31 41 51
| | | | | |
1 ANASAPAAAL FSTVVMKIGL LGILTLSLLG GNAPLWWGIA LLVLGMITAF VGGLYALVEH 60
61 NIQRLLAYHT LENIGIILLG LGAGVTGIAL EQPALIALGL VGGLYHLLNH SLFKSVLFLG 120
121 AGSVWFRTGH RDIEKLGGIG KKMPVISIAM LVGLMAMAAL PPLNGFAGEW VIYQSFFKLS 180
181 NSGAFVARLL GPLLAVGLAI TGALAVMCMA KVYGVTFLGA PRTKEAENAT CAPLLMSVSV 240
241 VALAICCVIG GVAAPWLLPM LSAAVPLPLE PANTTVSQPM ITLLLIACPL LPFIIMAICK 300
301 GD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [525-608] |
1 11 21 31 41 51
| | | | | |
1 RLPSRSRGAA WVCGYDHEKS MVITAHGFAM PVKQAFAPVL KLRKWLNPVS LVPGWQCEGS 60
61 ALLFRRMALV ELAVLVVIIV SRGA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.811 | a.46.1 | Methionine synthase domain |
| View | Download | 0.754 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.727 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.705 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.678 | a.7.1 | Spectrin repeat |
