YRC Public Data Repository - Protein Structure Prediction

Protein:	HTF_BLADI
Organism:	Blaberus discoidalis
Length:	72 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HTF_BLADI.

Description	E-value	Query Range	Subject Range
gi\|55140543 - gi\|55140543\|gb\|AAV41425.1\| adipokinetic hormone preproprotein [Periplaneta americana]	105.0	[0..1]	[72..1]
gi\|81170844, gi\|... - gi\|91083865\|ref\|XP_974200.1\| PREDICTED: hypothetical protein [Tribolium castaneum], gi\|81170844\|gb\|A...	99.0	[0..4]	[71..1]
gi\|158299445, gi... - gi\|158299445\|ref\|XP_001689190.1\| AGAP008834-PB [Anopheles gambiae str. PEST], gi\|157013523\|gb\|EDO633... gi\|88595938 - gi\|88595938\|gb\|ABD43194.1\| adipokinetic hormone I preproprotein [Anopheles gambiae]	90.0	[0..4]	[68..6]
gi\|157131132, gi... - gi\|157131132\|ref\|XP_001655817.1\| hypothetical protein AaeL_AAEL011996 [Aedes aegypti], gi\|108871660\|...	87.0	[0..4]	[68..6]
Akh-PA - The gene Adipokinetic hormone is referred to in FlyBase by the symbol Dmel\Akh (CG1171, FBgn0004552)...	84.0	[0..1]	[67..1]
gi\|54641782\|gb\|E... - GA11153-PA [Drosophila pseudoobscura], GA11153 [Drosophila pseudoobscura pseudoobscura] gi\|195172289, gi... - gi\|195172289\|ref\|XP_002026931.1\| GL12828 [Drosophila persimilis], gi\|194112699\|gb\|EDW34742.1\| GL1282... gi\|54641782, gi\|... - gi\|54641782\|gb\|EAL30532.1\| GA11153 [Drosophila pseudoobscura pseudoobscura], gi\|125977996\|ref\|XP_001...	77.0	[0..1]	[67..1]
gi\|116117450, gi... - gi\|118791126\|ref\|XP_001238167.1\| adipokinetic hormone 1 (AGAP008834-PA) [Anopheles gambiae str. PEST...	73.0	[0..4]	[57..6]
gi\|448528, gi\|74... - gi\|7428579\|pir\|\|AKLQS2 adipokinetic hormone II precursor - desert locust, gi\|448528\|prf\|\|1917247B ad...	71.0	[0..8]	[67..9]
AKH_MANSE - Adipokinetic prohormone OS=Manduca sexta PE=1 SV=1	71.0	[0..4]	[68..1]

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Predicted Domain #1

Region A:
Residues: [1-72]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHLVKVLIV VVAIALVLCE AQVNFSPGWG TGKRSAVQDS PCKGSAESLM YIYKLVQNEA  60
   61 QKILECEKFS SN

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	9.721246
Match:	PF06377.2
Description:	No description for PF06377.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits