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View Structure Prediction Details

Protein: HEPC2_MOUSE
Organism: Mus musculus
Length: 83 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HEPC2_MOUSE.

Description E-value Query
Range
Subject
Range
gi|192281975 - gi|192281975|emb|CAO00820.1| hepcidin [Larimichthys crocea]
gi|83416593 - gi|83416593|gb|ABC18307.1| hepcidin [Pseudosciaena crocea]
115.0 [0..1] [82..1]
gi|62638172, gi|... - gi|62638172|gb|AAX92671.1| hepcidin precursor [Scophthalmus maximus], gi|62638170|gb|AAX92670.1| hep...
109.0 [0..1] [82..1]
HAMP - hepcidin antimicrobial peptide
103.0 [0..1] [82..1]
HEPC_PONAB - Hepcidin OS=Pongo abelii GN=HAMP PE=3 SV=1
HEPC_PONPY - Hepcidin precursor - Pongo pygmaeus (Orangutan)
103.0 [0..1] [82..1]
gi|156530229, gi... - gi|157841284|ref|NP_001103163.1| hepcidin antimicrobial peptide [Pan troglodytes], gi|156530229|gb|A...
103.0 [0..1] [82..1]
gi|73765580 - gi|73765580|gb|AAZ85124.1| hepcidin precursor [Dicentrarchus labrax]
HEPC_MORCS - Hepcidin OS=Morone chrysops x Morone saxatilis GN=hamp PE=1 SV=1
gi|20799324, gi|... - gi|20799326|gb|AAM28440.1|AF394246_1 hepcidin precursor [Morone chrysops], gi|20799324|gb|AAM28439.1...
103.0 [0..1] [82..1]
gi|54660716, gi|... - gi|71841551|gb|AAZ43072.1| hepcidin precursor [Paralichthys olivaceus], gi|54660716|gb|AAV37453.1| h...
101.0 [0..1] [82..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSTRTQAA CLLLLLLASL SSTTYLQQQM RQTTELQPLH GEESRADIAI PMQKRRKRDI  60
   61 NFPICRFCCQ CCNKPSCGIC CEE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 60.309804
Match: PF06446.3
Description: No description for PF06446.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.510 N/A N/A a.29.14 Description not found.
View Download 0.481 N/A N/A f.17.1 F1F0 ATP synthase subunit C
View Download 0.467 N/A N/A d.26.1 FKBP-like
View Download 0.457 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.457 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.405 N/A N/A a.138.1 Multiheme cytochromes
View Download 0.400 N/A N/A d.26.1 FKBP-like
View Download 0.376 N/A N/A a.24.21 Description not found.
View Download 0.376 N/A N/A a.29.4 RecG, N-terminal domain


YRC Informatics Platform - Version 3.0
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