| Protein: | HOFC_ECOLI |
| Organism: | Escherichia coli |
| Length: | 400 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HOFC_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..3] | [397..7] |
|
|
391.0 | [0..6] | [396..10] |
|
|
386.0 | [0..2] | [396..6] |
|
|
386.0 | [0..4] | [397..1] |
|
|
386.0 | [0..6] | [397..14] |
|
|
385.0 | [0..3] | [396..7] |
|
|
384.0 | [0..1] | [396..1] |
|
|
383.0 | [0..2] | [396..6] |
|
|
383.0 | [0..6] | [396..13] |
|
|
383.0 | [0..3] | [396..7] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MASKQLWRWH GITGDGNAQD GMLWAESRTL LLMALQQQMV TPLSLKRIAI NSAQWRGDKS 60
61 AEVIHQLATL LKAGLTLSEG LALLAEQHPS KQWQALLQSL AHDLEQGIAF SNALLPWSEV 120
121 FPPLYQAMIR TGELTGKLDE CCFELARQQK AQRQLTDKVK SALRYPIIIL AMAIMVVVAM 180
181 LHFVLPEFAA IYKTFNTP
|
| Detection Method: |  |
| Confidence: | 18.431798 |
| Match: | PF00482.14 |
| Description: | No description for PF00482.14 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [199-400] |
1 11 21 31 41 51
| | | | | |
1 LPALTQGIMT LADFSGEWSW LLVLFGFLLA IANKLLMRRP TWLIVRQKLL LRIPIMGSLM 60
61 RGQKLTQIFT ILALTQSAGI TFLQGVESVR ETMRCPYWVQ LLTQIQHDIS NGQPIWLALK 120
121 NTGEFSPLCL QLVRTGEASG SLDLMLDNLA HHHRENTMAL ADNLAALLEP ALLIITGGII 180
181 GTLVVAMYLP IFHLGDAMSG MG
|
| Detection Method: | |
| Confidence: | 16.30103 |
| Match: | PF00482.14 |
| Description: | No description for PF00482.14 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.689 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.623 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.511 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.508 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.496 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
