| Protein: | hdc-PC |
| Organism: | Drosophila melanogaster |
| Length: | 1080 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hdc-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
1049.0 | [0..1] | [1080..1] |
|
Region A: Residues: [1-278] |
1 11 21 31 41 51
| | | | | |
1 MAPRRNSNIS SSGNSTQQQH QQQLQQQHQT QQHQLLQFYA ENVNSSGVLM APMQGTGGVG 60
61 GVGGGGMVHC CLPSGDCRKL DTLIHLNELS LADCIRVLCN NENCSAGQYM HRECFEWWEA 120
121 SVLQALKANG RARSWSERQR LQHLWTKKGY ELVQKACSCK CGRGQLRKDL DWVPPSSQGV 180
181 IYLNGSGNRP TLANGSLSED DDKKKAKKKR NRNNNNNNGG GGGGGAGVNG NTKTPLSNNN 240
241 GNSYAGLTPN PNVGVIGSGL PHNNGNTASN GSSGNNGS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [279-425] |
1 11 21 31 41 51
| | | | | |
1 SGVLQTSALA TFSNILNTNN VLGLDLRARA GSLSSSGAGS GSTSPSDSQS SGEISVSPVQ 60
61 QLLPQQQQQQ QQSLLIQPLG PAFGSNLLQN GLGLSKNLLI APQQQQQQQL QQQQQQQNNL 120
121 PALANISNFK PLASYEQQQL VQQQKNK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [426-510] |
1 11 21 31 41 51
| | | | | |
1 EVELYSDRVR STSGCNGIFS RRLDFSSFNL LPKTRLNSYQ VKIEDEGNHG NDETRLFILS 60
61 SLAQSQMSRV ACILCEEPLL VFDRY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [511-645] |
1 11 21 31 41 51
| | | | | |
1 PLVDGSFFLS PKQHSSGCIE VKYEGRTLYL TCVCMSCLDG TSSSRAINCR FCKEPWDGSS 60
61 LVLGTMYAYD IFAAMPCCAE RFKCNNCFKM LMHPQQRLSF YSDYSHGVTC PYCNTQDTHF 120
121 VKPLTFCYAK TTATR
|
| Detection Method: | |
| Confidence: | 1.03 |
| Match: | 2dfyX |
| Description: | No description for 2dfyX was found. |
|
Region A: Residues: [646-960] |
1 11 21 31 41 51
| | | | | |
1 LPTLAXHEAP LESPVGTGAT TTQVPNAQGS PTASGCSSNT IASKQPPKQP LYNAAIDYSA 60
61 PLQQQINPDL IGAHPHAQQH QQQVRQQQQQ QQQQQPQQQQ QQQQQQTQQQ QSQQQQQQQQ 120
121 QQHQPVVSTF QRGNFPQQSH KTMNMMAMAD VMSKYQQQQH QQQQQQRQQQ HNLQPQQQHA 180
181 TQKGLEGLLL TNTNTSNNNS SSSSSSSISN LIISHNSASN TGNKMQPTWG QSDAISALWG 240
241 CSSSSSGCSS GSGSQPSLSP TASSNGNDGS KMMLWAAQSS PQNAATLRDG FKELQRQQPP 300
301 QQQVPQQQPH AASPT
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [961-1080] |
1 11 21 31 41 51
| | | | | |
1 ASLTSSSSSS NGWSASHYGK PNIWELPGST GQRTPASSHD IFTDLLCNLS ISQDNSSQQA 60
61 SSKADASDVS SNSSSSAGEL LEAANIWRFP EYASSQLYME EPTGGAAACM QLFNDYLNMN 120
121
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
