| Protein: | gi|151942828 |
| Organism: | Saccharomyces cerevisiae YJM789 |
| Length: | 356 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151942828.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..356] | [1..356] |
|
|
1.0E-99 | [91..356] | [12..254] |
|
|
2.0E-99 | [90..356] | [11..254] |
|
|
6.0E-89 | [76..354] | [9..284] |
|
|
4.0E-87 | [77..354] | [16..286] |
|
|
5.0E-84 | [85..356] | [11..271] |
|
|
3.0E-81 | [86..356] | [1..252] |
|
|
8.0E-81 | [78..354] | [17..288] |
|
|
5.0E-76 | [81..348] | [161..415] |
|
Region A: Residues: [1-54] |
1 11 21 31 41 51
| | | | | |
1 MSKRNTPPLR SSGINTIQIN AAREMHAQTV RARRMPMPTS GITTPSVQPT AAPA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.298 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.323 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.286 | d.68.3 | SirA-like |
| View | Download | 0.275 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.356 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.236 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.220 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [55-299] |
1 11 21 31 41 51
| | | | | |
1 TPPRHICNNP NNPQCLHCGS VIIPSPRATL PLEDNPSISI NDWTISSRKK PILNSQELDI 60
61 WENEKLKGLT LPEMIFGNNY IRIENSKQHW SIEFNALDAL KEVQLQDSGI RVAYSNDWIN 120
121 SKKRQNSTNG AQRFTNDVND DSLNIIHKYD WTYTTRYKGT ESSPESKFRL DNDQKLPLDK 180
181 LAVHDKILFY DDMILFEDEL ADNGISILNV KIRVMNERLL LLSRFFLRVD DVLVRVYDTR 240
241 IYVEF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [300-356] |
1 11 21 31 41 51
| | | | | |
1 DENVVIRESK EFEGKYQDVL AKHRLSQSHD PKAALRDSNW VAQNTPMIKR QCEIIQF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.590 | a.4.1 | Homeodomain-like |
| View | Download | 0.546 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.455 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.616 | a.112.1 | Description not found. |
| View | Download | 0.448 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.435 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.431 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.425 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.422 | a.4.1 | Homeodomain-like |
| View | Download | 0.402 | a.4.1 | Homeodomain-like |
| View | Download | 0.390 | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.388 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.384 | a.4.1 | Homeodomain-like |
| View | Download | 0.383 | d.71.1 | Cell division protein MinE topological specificity domain |
| View | Download | 0.381 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.372 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.360 | a.5.2 | UBA-like |
| View | Download | 0.352 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.324 | a.159.2 | FF domain |
| View | Download | 0.315 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.309 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.300 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.297 | a.4.1 | Homeodomain-like |
| View | Download | 0.296 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.276 | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.264 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.264 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.263 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.262 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.258 | a.2.7 | tRNA-binding arm |
| View | Download | 0.254 | a.64.1 | Saposin |
| View | Download | 0.247 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.247 | a.4.1 | Homeodomain-like |
| View | Download | 0.244 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.244 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.242 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.239 | a.20.1 | PGBD-like |
| View | Download | 0.237 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.234 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.234 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.223 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.222 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.218 | a.21.1 | HMG-box |
| View | Download | 0.212 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.211 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.211 | a.105.1 | FIS-like |
| View | Download | 0.204 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.202 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
