YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|151941113
Organism:	Saccharomyces cerevisiae YJM789
Length:	583 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151941113.

Description	E-value	Query Range	Subject Range
gi\|207343299 - gi\|207343299\|gb\|EDZ70800.1\| YLL061Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi\|190405994 - gi\|190405994\|gb\|EDV09261.1\| high affinity S-methylmethionine permease [Saccharomyces cerevisiae RM11... MMP1 - High-affinity S-methylmethionine permease, required for utilization of S-methylmethionine as a sulfu... MMP1_YEAST - S-methylmethionine permease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMP1 PE=1 ... gi\|151941113 - gi\|151941113\|gb\|EDN59491.1\| S-methylmethionine permease [Saccharomyces cerevisiae YJM789]	0.0	[1..583]	[1..583]
gi\|68470470, gi\|... - gi\|68470731\|ref\|XP_720611.1\| N-acetylglucosamine-inducible general amino acid permease [Candida albi... gi\|18568390 - gi\|18568390\|gb\|AAL76065.1\| Gap1 protein [Candida albicans] gi\|238882678 - gi\|238882678\|gb\|EEQ46316.1\| general amino-acid permease GAP1 [Candida albicans WO-1]	0.0	[18..583]	[17..582]
gi\|447739 - gi\|447739\|prf\|\|1915304A nylB upstream ORF	0.0	[1..582]	[22..608]

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Predicted Domain #1

Region A:
Residues: [1-583]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEFESTKLS KVQFSTSVLS TPSNEGNNLI HRFKNSFKRN DSPAIQEGLL YSELSEEEKI  60
   61 QWDLANQPYK KVLDQRHLTM IAIGGTLGTG LFIGLGESLA SGPASLLIGF LLVGASMLCV 120
  121 VQCGAELSCQ YPVSGSYALH ASRFIDPSVG FSIGINYLLM WLISYPSELV GCSLTISYWA 180
  181 PSVNPAAWVA IAFVLSMLLN LFGARGFAES EFYMSIFKIV ALFIFIIIGI VLIAGGGPDS 240
  241 TGYIGTKYWH DPGSFAVPVF KNLCNTFVSA AYSFSGTEMV VLTSTEARSV SSVSRAAKGT 300
  301 FWRIIIFYIV TVIIIGCLVP YNDPRLISGS SSEDITASPF VIALSNTGAM GTRVSHFMNA 360
  361 VILIAVFSVC NSCVYASSRL IQGLATAGQL PKICAYMDRN GRPLVGMAIC GAFGLLGFLV 420
  421 VSKNQGTVFT WLFALCSISF FTTWFCICFC QVRFRMAMKA QGRSKDDIIY RSTLGIYGGI 480
  481 FGCILNVLLV IGEIYVSAAP VGSPSSAANF FEYCMSIPIM IAVYIGHRIY RRDWRHWYIK 540
  541 RMDIDLDSGH SLEDFEATKL ERDEDKKYVS SKPLYYRIYR FFC

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	161.154902
Match:	PF00324
Description:	Amino acid permease

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits