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View Structure Prediction Details

Protein: gi|151945644
Organism: Saccharomyces cerevisiae YJM789
Length: 207 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151945644.

Description E-value Query
Range
Subject
Range
gi|14042242 - gi|14042242|dbj|BAB55166.1| unnamed protein product [Homo sapiens]
4.0E-54 [7..204] [17..217]
TMED4_MOUSE - Transmembrane emp24 domain-containing protein 4 OS=Mus musculus GN=Tmed4 PE=1 SV=1
8.0E-53 [8..203] [12..225]
gi|151945644 - gi|151945644|gb|EDN63885.1| emp24p/erv25p-related protein [Saccharomyces cerevisiae YJM789]
ERP4 - Protein with similarity to Emp24p and Erv25p, member of the p24 family involved in ER to Golgi trans...
ERP4_YEAST - Protein ERP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERP4 PE=1 SV=1
1.0E-51 [1..207] [1..207]
TMEDA_RABIT - Transmembrane emp24 domain-containing protein 10 OS=Oryctolagus cuniculus GN=TMED10 PE=1 SV=1
4.0E-49 [11..203] [16..216]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFTLIAIL FSSSLLTHAF SSNYAPVGIS LPAFTKECLY YDLSSDKDVL VVSYQVLTGG  60
   61 NFEIDFDITA PDGSVIVTER QKKHSDFLLK SFGIGKYTFC LSNNYGTSPK KVEITLEKEK 120
  121 EIVSSHESKE DIIANNAIEE IDRNLNKITK TMDYLRAREW RNMYTVSSTE SRLTWLSLLI 180
  181 MGVMVGISIV QALIIQFFFT SRQKNYV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 75.236572
Match: PF01105
Description: emp24/gp25L/p24 family/GOLD

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEEIDRNLNK ITKTMDYLRA REWRNMYTVS STESRLTWLS LLIMGVMVGI SIVQALIIQF  60
   61 FFTSRQKNYV 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle