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View Structure Prediction Details

Protein: gi|147898033, gi...
Organism: synthetic construct
Length: 851 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|147898033, gi....

Description E-value Query
Range
Subject
Range
ESF1_MOUSE - ESF1 homolog OS=Mus musculus GN=Esf1 PE=1 SV=1
351.0 [0..1] [851..1]
gi|109092936, gi... - gi|109092938|ref|XP_001083582.1| PREDICTED: similar to ABT1-associated protein isoform 2 [Macaca mul...
334.0 [0..1] [851..1]
gi|42491219 - gi|42491219|dbj|BAD10946.1| ABTAP [Rattus rattus]
ESF1_RAT - ESF1 homolog OS=Rattus norvegicus GN=Esf1 PE=1 SV=1
327.0 [0..1] [851..1]
gi|73991143 - gi|73991143|ref|XP_534341.2| PREDICTED: similar to ABT1-associated protein isoform 1 [Canis familiar...
313.0 [0..1] [851..1]
gi|71895765, gi|... - gi|71895765|ref|NP_001026690.1| ESF1, nucleolar pre-rRNA processing protein, homolog [Gallus gallus]...
260.0 [0..1] [851..1]
gi|28374250, gi|... - gi|28374250|gb|AAH46107.1| ESF1 protein [Homo sapiens], gi|116283795|gb|AAH30513.1| ESF1 protein [Ho...
258.0 [0..1] [595..1]
gi|9916, gi|627059 - gi|9916|emb|CAA39663.1| liver stage antigen [Plasmodium falciparum], pir||A45592 liver stage antigen...
257.0 [0..4] [848..642]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKQEIMSD QRFRRVAKDP RFWEMPEKDR KVKIDKRFRA MFHDKKFKLN YAVDKRGRPI  60
   61 SHSTTEDLKR FYDLSDSDSN LS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEDSKALSQK KIKKKKTQTK KEIDSKNLVE KKKETKKANH KGSENKTDLD NSIGIKKMKT  60
   61 SCKFKIDSNI SPKKDSKEFT QKNKKEKKNI VQHTTDSSLE EKQRTLDSGT SE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [195-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IVKSPRIECS KTRREMQSVV QLIMTRDSDG YENSTDGEMC DKDALEEDSE SVSEIGSDEE  60
   61 SENEITSVGR ASGDDDGSED DEEEDEDEEE DEDEDSEDDD KSDSGPDLAR GKGNIETSSE 120
  121 DEDDTADLFP EESGFEHAWR ELDKDAPRAD E

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [346-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITRRLAVCNM DWDRLKAKDL LALFNSFKPK GGVIFSVKIY PSEFGKERMK EEQVQGPVEL  60
   61 LSIPEDAPEK DWTSREKLRD YQFKRLKYYY AVVDCDSPET ASKIYED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [453-694]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CDGLEFESSC SFIDLRFIPD DITFDDEPKD VASEVNLTAY KPKYFTSAAM GTSTVEITWD  60
   61 ETDHERITML NRKFKKEELL DMDFQAYLAS SSEDEEEIEE ELQGDDGVNV EEDGKTKKSQ 120
  121 KDDEEQIAKY RQLLQVIQEK EKKGKENDME MEIKWVPGLK ESAEEMVKNK LEGKDKLTPW 180
  181 EQFLEKKKEK KRLKRKQKAL AEEASEEELP SDVDLNDPYF AEEVKQIGIN KKSVKSAKDG 240
  241 TS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [695-851]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEEEIEIERQ KAEMALLMMD EDEDSKKHFN YNKIVEHQNL SKKKKKQLMK KKELIEDDFE  60
   61 VNVNDARFQA MYTSHLFNLD PSDPNFKKTK AMEKILEEKA RQRERKEQEL TQAIKKKESE 120
  121 IEKESQRKSI DPALSMLIKS IKTKTEQFQA RKKQKVK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle