| Protein: | gi|151946414 |
| Organism: | Saccharomyces cerevisiae YJM789 |
| Length: | 633 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151946414.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..633] | [1..633] |
|
|
0.0 | [1..633] | [1..633] |
|
|
1.0E-96 | [76..628] | [19..550] |
|
|
2.0E-92 | [56..618] | [3..542] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MPDNLSLHLS GSSKRLNSRQ LMESSNETFA PNNVDLEKEY KSSQSNITTE VYEASSFEEK 60
61 VSSEKPQYSS FWKKIYYEYV VVDKSILGVS IL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.382 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.291 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.510 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.510 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.382 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.359 | c.103.1 | Hypothetical protein MT938 (MTH938) |
| View | Download | 0.359 | c.103.1 | Hypothetical protein MT938 (MTH938) |
| View | Download | 0.291 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
|
Region A: Residues: [93-578] |
1 11 21 31 41 51
| | | | | |
1 DSFMYNQDLK PVEKERRVWS WYNYCYFWLA ECFNINTWQI AATGLQLGLN WWQCWITIWI 60
61 GYGFVGAFVV LASRVGSAYH LSFPISSRAS FGIFFSLWPV INRVVMAIVW YSVQAYIAAT 120
121 PVSLMLKSIF GKDLQDKIPD HFGSPNATTY EFMCFFIFWA ASLPFLLVPP HKIRHLFTVK 180
181 AVLVPFASFG FLIWAIRRAH GRIALGSLTD VQPHGSAFSW AFLRSLMGCM ANFSTMVINA 240
241 PDFSRFSKNP NSALWSQLVC IPFLFSITCL IGILVTAAGY EIYGINYWSP LDVLEKFLQT 300
301 TYNKGTRAGV FLISFVFAVA QLGTNISANS LSCGTDMSAI FPKFINIKRG SLFCAAMALC 360
361 ICPWNLMATS SKFTMALSAY AIFLSSIAGV VCSDYFVVRR GYIKLTHIYS HQKGSFYMYG 420
421 NRFGINWRAL AAYLCGVAPC LPGFIAEVGA PAIKVSDGAM KLYYLSYWVG YGLSFSSYTA 480
481 LCYFFP
|
| Detection Method: | |
| Confidence: | 248.49485 |
| Match: | PF02133 |
| Description: | Permease for cytosine/purines, uracil, thiamine, allantoin |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [579-633] |
1 11 21 31 41 51
| | | | | |
1 VPGCPVNNII KDKGWFQRWA NVDDFEEEWK DTIERDDLVD DNISVYEHEH EKTFI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.452 | a.4.1 | Homeodomain-like |
| View | Download | 0.349 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.280 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.297 | d.7.1 | LysM domain |
| View | Download | 0.372 | a.4.1 | Homeodomain-like |
| View | Download | 0.270 | d.76.1 | GYF domain |
| View | Download | 0.252 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.250 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.229 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.228 | a.60.2 | RuvA domain 2-like |
