YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|151945381
Organism:	Saccharomyces cerevisiae YJM789
Length:	151 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151945381.

Description	E-value	Query Range	Subject Range
MBF1_DEBHA - Multiprotein-bridging factor 1 OS=Debaryomyces hansenii GN=MBF1 PE=3 SV=1 MBF1_DEBHA - Multiprotein-bridging factor 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NB...	137.0	[0..1]	[150..1]
MBF1_ASHGO - Multiprotein-bridging factor 1 OS=Ashbya gossypii GN=MBF1 PE=3 SV=1 MBF1_ASHGO - Multiprotein-bridging factor 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL...	136.0	[0..2]	[151..3]
MBF1_CANGA - Multiprotein-bridging factor 1 OS=Candida glabrata GN=MBF1 PE=3 SV=1 MBF1_CANGA - Multiprotein-bridging factor 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 062...	133.0	[0..1]	[151..1]
gi\|50312323, gi\|... - gi\|50312323\|ref\|XP_456195.1\| unnamed protein product [Kluyveromyces lactis], gi\|49645331\|emb\|CAG9890...	130.0	[0..1]	[150..48]
MBF1_YARLI - Putative multi-protein-binding factor 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=MBF1 PE=... MBF1_YARLI - Putative multi-protein-binding factor 1 OS=Yarrowia lipolytica GN=MBF1 PE=3 SV=1	128.0	[0..2]	[151..3]
MBF1_KLULA - Multiprotein-bridging factor 1 OS=Kluyveromyces lactis GN=MBF1 PE=3 SV=2 MBF1_KLULA - Multiprotein-bridging factor 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NB...	127.0	[0..1]	[150..1]
SPBC83.17 - transcriptional coactivator, multiprotein bridging factor Mbf1 MBF1_SCHPO - Multiprotein-bridging factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mbf1 PE=3 S...	125.0	[0..1]	[151..1]
MBF1_CANAL - Multiprotein-bridging factor 1 OS=Candida albicans GN=MBF1 PE=3 SV=1 gi\|238879398 - gi\|238879398\|gb\|EEQ43036.1\| multiprotein-bridging factor 1 [Candida albicans WO-1] MBF1_CANAL - Multiprotein-bridging factor 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MBF1 PE=3 SV=1	124.0	[0..2]	[150..3]
gi\|109109703 - gi\|109109703\|ref\|XP_001092659.1\| PREDICTED: similar to endothelial differentiation-related factor 1 ...	124.0	[0..2]	[133..4]
gi\|54641337, gi\|... - gi\|54641337\|gb\|EAL30087.1\| GA17985 [Drosophila pseudoobscura pseudoobscura], gi\|125977112\|ref\|XP_001... gi\|54641337\|gb\|E... - GA17985-PA [Drosophila pseudoobscura], GA17985 [Drosophila pseudoobscura pseudoobscura] gi\|195168135, gi... - gi\|195168135\|ref\|XP_002024887.1\| GL17867 [Drosophila persimilis], gi\|194108317\|gb\|EDW30360.1\| GL1786...	123.0	[0..1]	[151..1]

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Predicted Domain #1

Region A:
Residues: [1-51]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDWDTNTII GSRARAGGSG PRANVARSQG QINAARRQGL VVSVDKKYGS T

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [52-151]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTRGDNEGQR LTKVDRETDI VKPKKLDPNV GRAISRARTD KKMSQKDLAT KINEKPTVVN  60
   61 DYEAARAIPN QQVLSKLERA LGVKLRGNNI GSPLGAPKKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	6.30103
Match:	1lliA
Description:	lambda C1 repressor, DNA-binding domain
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits