| Protein: | gi|151944072 |
| Organism: | Saccharomyces cerevisiae YJM789 |
| Length: | 243 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151944072.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..243] | [1..243] |
|
Region A: Residues: [1-243] |
1 11 21 31 41 51
| | | | | |
1 MARNRTTSKK NVQSKRLIDR VVPMDKIKKV GVAKKKTVEH TKEGFSVVNG KLVSSNDVGV 60
61 LLREAQGAID KRTNVSQRNR KKGIKNNRPH KDINSSPDWG NAHRGTDWQS EKANGMNRAK 120
121 NSRNFTTNIK LQRQHFGEEI QGGSQLVIST NSDASDKLLM LFNLTLGVNQ ENLKNVLENI 180
181 SQVQIAQIRV RDLPSGSATA KVRLAYPTTQ SLEKVRKLFH GALVDGRRIQ VVIASDESSH 240
241 LSY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [98-243] |
1 11 21 31 41 51
| | | | | |
1 DWGNAHRGTD WQSEKANGMN RAKNSRNFTT NIKLQRQHFG EEIQGGSQLV ISTNSDASDK 60
61 LLMLFNLTLG VNQENLKNVL ENISQVQIAQ IRVRDLPSGS ATAKVRLAYP TTQSLEKVRK 120
121 LFHGALVDGR RIQVVIASDE SSHLSY
|
| Detection Method: | |
| Confidence: | 1.34 |
| Match: | 1hl6A |
| Description: | CG8781 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.3324591601331 | bayes_pls_golite062009 |
| RNA binding | 3.32086587430292 | bayes_pls_golite062009 |
| nucleic acid binding | 2.07488701626356 | bayes_pls_golite062009 |
| protein binding | 1.26544376923141 | bayes_pls_golite062009 |
| mRNA binding | 0.574543535689413 | bayes_pls_golite062009 |
| 0.398042844948441 | bayes_pls_golite062009 |
