YRC Public Data Repository - Protein Structure Prediction

Protein:	MMM1_YEAS7
Organism:	Saccharomyces cerevisiae YJM789
Length:	426 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MMM1_YEAS7.

Description	E-value	Query Range	Subject Range
gi\|577671 - gi\|577671\|gb\|AAA53581.1\| Mmm1p [Saccharomyces cerevisiae]	763.0	[0..1]	[426..1]
gi\|19112326 - gi\|19112326\|ref\|NP_595534.1\| hypothetical protein SPBC30B4.09c [Schizosaccharomyces pombe 972h-] gi\|3417435, gi\|1... - pir\|\|T40175 mitochondrial outer membrane protein - fission yeast (Schizosaccharomyces pombe), gi\|3...	493.0	[0..96]	[425..8]
gi\|2257566 - gi\|2257566\|dbj\|BAA21458.1\| MITOCHONDRIAL OUTER MEMBRANE PROTEIN MMM1 [Schizosaccharomyces pombe]	484.0	[0..96]	[425..40]
MMM1_NEUCR - Maintenance of mitochondrial morphology protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-... MMM1_NEUCR - Maintenance of mitochondrial morphology protein 1 OS=Neurospora crassa GN=mmm1 PE=2 SV=1	475.0	[0..96]	[419..14]
gi\|42544365, gi\|... - gi\|46111429\|ref\|XP_382772.1\| hypothetical protein FG02596.1 [Gibberella zeae PH-1], gi\|42544365\|gb\|E...	430.0	[0..96]	[419..15]
MMM1_CANGA - Maintenance of mitochondrial morphology protein 1 OS=Candida glabrata GN=MMM1 PE=3 SV=1 MMM1_CANGA - Maintenance of mitochondrial morphology protein 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / ...	423.0	[0..4]	[421..9]
MMM1_KLULA - Maintenance of mitochondrial morphology protein 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 23... MMM1_KLULA - Maintenance of mitochondrial morphology protein 1 OS=Kluyveromyces lactis GN=MMM1 PE=3 SV=1	420.0	[0..12]	[422..36]
MMM1_MAGGR - Maintenance of mitochondrial morphology protein 1 OS=Magnaporthe grisea GN=MMM1 PE=3 SV=1 MMM1_MAGO7 - Maintenance of mitochondrial morphology protein 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-461...	420.0	[0..96]	[419..15]
MMM1_ASHGO - Maintenance of mitochondrial morphology protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51... MMM1_ASHGO - Maintenance of mitochondrial morphology protein 1 OS=Ashbya gossypii GN=MMM1 PE=3 SV=1	403.0	[0..4]	[422..29]

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Predicted Domain #1

Region A:
Residues: [1-84]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDSENESTE TDSLMTFDDY ISKELPEHLQ RLIMENLKGS TTNDLKQTSN NSEFNVSKNG  60
   61 SFKGLDDAIQ ALQMQSVLHP SSLG

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [85-426]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLATSSKFSG WSFAQGFFVG QLSIVLLFIF FLKFFIFSDE PSKSKNPKPA ASRHRSKFKE  60
   61 YPFISREFLT SLVRKGAKQH YELNEEAENE HLQELALILE KTYYNVDVHP AESLDWFNVL 120
  121 VAQIIQQFRS EAWHRDNILH SLNDFIGRKS PDLPEYLDTI KITELDTGDD FPIFSNCRIQ 180
  181 YSPNSGNKKL EAKIDIDLND HLTLGVETKL LLNYPKPGIA ALPINLVVSI VRFQACLTVS 240
  241 LTNAEEFAST SNGSSSENGM EGNSGYFLMF SFSPEYRMEF EIKSLIGSRS KLENIPKIGS 300
  301 VIEYQIKKWF VERCVEPRFQ FVRLPSMWPR SKNTREEKPT EL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits