YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|151942433
Organism:	Saccharomyces cerevisiae YJM789
Length:	175 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|151942433.

Description	E-value	Query Range	Subject Range
gi\|207346247 - gi\|207346247\|gb\|EDZ72800.1\| YDR469Wp-like protein [Saccharomyces cerevisiae AWRI1631] SDC1 - Subunit of the COMPASS (Set1C) complex, which methylates lysine 4 of histone H3 and is required in c... gi\|190404608 - gi\|190404608\|gb\|EDV07875.1\| compass component [Saccharomyces cerevisiae RM11-1a] gi\|151942433 - gi\|151942433\|gb\|EDN60789.1\| COMPASS (complex proteins associated with Set1p) component [Saccharomyce... SDC1_YEAST - COMPASS component SDC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDC1 PE=1 SV=1	7.0E-56	[1..175]	[1..175]
gi\|14578322 - gi\|14578322\|gb\|AAF99488.1\| PV1H14210_P [Plasmodium vivax]	9.0E-36	[42..161]	[721..866]
gi\|23957728, gi\|... - gi\|23957728\|ref\|NP_473185.2\| hypothetical protein [Plasmodium falciparum 3D7], gi\|15375380\|emb\|CAB39...	2.0E-35	[42..172]	[937..1104]
KAD7_MOUSE - Adenylate kinase 7 OS=Mus musculus GN=Ak7 PE=1 SV=1	5.0E-30	[68..160]	[525..609]
gi\|22748715, gi\|... - gi\|22748715\|ref\|NP_689540.1\| adenylate kinase 7 [Homo sapiens], gi\|16553126\|dbj\|BAB71480.1\| unnamed ...	1.0E-24	[68..160]	[634..718]
gi\|15208111 - gi\|15208111\|dbj\|BAB63080.1\| hypothetical protein [Macaca fascicularis]	1.0E-24	[68..160]	[439..523]
FBpp0305197, Dpy... - The gene Dpy-30-like 2 is referred to in FlyBase by the symbol Dmel\Dpy-30L2 (CG11591, FBgn0035491).... gi\|220951736 - gi\|220951736\|gb\|ACL88411.1\| CG11591-PA [synthetic construct]	5.0E-21	[112..172]	[38..98]

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Predicted Domain #1

Region A:
Residues: [1-175]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNESENSPQH NEVTVPMVED TSSNADIPME QIQREDNKNY DKHDNECFDM NGNHNNNSDN  60
   61 LQFDSVPSSA TKDLKNIKSV TNQNVKIEES SSTNSVIEES SEPKISKLEN VNLAATVGGS 120
  121 QTRKYLNTNV TPHLLAGMRL IAVQQPEDPL RVLGEYLIEQ SNILKSGEKE SNASK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits