YRC Public Data Repository - Protein Structure Prediction

Protein:	GLRX_SOLLC
Organism:	Solanum lycopersicum
Length:	108 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLRX_SOLLC.

Description	E-value	Query Range	Subject Range
gi\|116310771, gi... - gi\|125548975\|gb\|EAY94797.1\| hypothetical protein OsI_16580 [Oryza sativa Indica Group], gi\|116310771... GRXC6_ORYSA, GLR... - Glutaredoxin-C6 (Glutaredoxin-C2 homolog 1) - Oryza sativa (Rice), (P55142) Glutaredoxin GRXC6_ORYSJ - Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2	140.0	[0..1]	[107..1]
GLRX_ORYSA - (P55142) Glutaredoxin	140.0	[0..1]	[107..1]
gi\|2724050, gi\|2... - gi\|2724056\|gb\|AAB92658.1\| glutaredoxin type I [Fritillaria agrestis], gi\|2724054\|gb\|AAB92657.1\| glut...	135.0	[0..1]	[104..1]
GRXC2_ARATH - Glutaredoxin-C2 OS=Arabidopsis thaliana GN=GRXC2 PE=2 SV=1	133.0	[0..1]	[107..1]
gi\|32401362 - gi\|32401362\|gb\|AAP80853.1\| glutaredoxin [Triticum aestivum]	132.0	[0..1]	[107..1]
gi\|20141083 - gi\|20141083\|gb\|AAK53442.2\|AF374461_1 glutaredoxin [Deschampsia antarctica]	131.0	[0..1]	[107..1]
GLRX_RICCO - Glutaredoxin OS=Ricinus communis PE=3 SV=1	131.0	[0..1]	[102..1]
gi\|15637350 - gi\|15637350\|gb\|AAL04507.1\|AF406809_1 glutaredoxin [Tilia platyphyllos]	130.0	[0..1]	[96..1]

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Predicted Domain #1

Region A:
Residues: [1-108]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAKAKEIV SGNPVAVFSK TYCPFCVSVK DLLSKLGATF KAVELDSEKD GSEIQAALAE  60
   61 WTGQRTVPNV FIGRKHIGGC DATTALHREG KLLPLLTEAG AIAKTSTA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.522879
Match:	2e7pA
Description:	No description for 2e7pA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits