YRC Public Data Repository - Protein Structure Prediction

Protein:	GBG_CANGA
Organism:	Candida glabrata
Length:	88 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GBG_CANGA.

Description	E-value	Query Range	Subject Range
gi\|116192069, gi... - gi\|88181665\|gb\|EAQ89133.1\| guanine nucleotide-binding protein gamma subunit [Chaetomium globosum CBS...	144.0	[0..2]	[88..14]
gi\|216408347 - gi\|216408347\|gb\|ACJ72865.1\| G protein gamma subunit [Gibberella moniliformis] gi\|42554990, gi\|... - gi\|46125715\|ref\|XP_387411.1\| hypothetical protein FG07235.1 [Gibberella zeae PH-1], gi\|42554990\|gb\|E...	144.0	[0..2]	[88..14]
GBG_NEUCR - Guanine nucleotide-binding protein subunit gamma OS=Neurospora crassa GN=gng-1 PE=3 SV=2 GBG_NEUCR - Guanine nucleotide-binding protein subunit gamma OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1...	140.0	[0..2]	[88..14]
gi\|86611487 - gi\|86611487\|gb\|ABD14415.1\| G-protein gamma subunit [Magnaporthe grisea] gi\|145614320, gi... - gi\|145614320\|ref\|XP_365973.2\| hypothetical protein MGG_10193 [Magnaporthe grisea 70-15], gi\|14502126...	139.0	[0..2]	[88..14]
gi\|39969165, gi\|... - gi\|39969165\|ref\|XP_365973.1\| hypothetical protein MG10193.4 [Magnaporthe grisea 70-15], gb\|EAA57518....	138.0	[0..2]	[88..85]
gi\|110350998 - gi\|110350998\|gb\|ABG73391.1\| G protein gamma subunit [Emericella nidulans]	135.0	[0..2]	[88..11]
gi\|115388523, gi... - gi\|115388523\|ref\|XP_001211767.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	135.0	[0..2]	[88..11]
gi\|110350996 - gi\|110350996\|gb\|ABG73390.1\| G protein gamma subunit [Aspergillus fumigatus] gi\|159130744 - gi\|159130744\|gb\|EDP55857.1\| G-protein complex gamma subunit Ste18/GpgA [Aspergillus fumigatus A1163] gi\|146322463, gi... - gi\|146322463\|ref\|XP_750270.2\| G-protein complex gamma subunit GpgA [Aspergillus fumigatus Af293], gi...	134.0	[0..2]	[88..11]
gi\|49080400, gi\|... - gi\|71024053\|ref\|XP_762256.1\| hypothetical protein UM06109.1 [Ustilago maydis 521], ref\|XP_403724.1\| ...	134.0	[0..1]	[87..59]
gi\|44981652 - gi\|44981652\|gb\|AAS51402.1\| ACR176Cp [Ashbya gossypii ATCC 10895] gi\|44981652, gi\|... - gi\|45185862\|ref\|NP_983578.1\| ACR176Cp [Ashbya gossypii ATCC 10895], gi\|44981652\|gb\|AAS51402.1\| ACR17...	127.0	[0..3]	[88..31]

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Predicted Domain #1

Region A:
Residues: [1-88]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSQSQLDL KIKYLKLKRI NELNDKLRDE LQRERITASN ACLQLIAYTT STRDYALPTL  60
   61 WGYPPADTNH FRDFQTQHAD DATCCTIM

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.48
Match:	1xhmB
Description:	The Crystal Structure of a Biologically Active Peptide (SIGK) Bound to a G Protein Beta:Gamma Heterodimer
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits