YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|149007790, gi...
Organism:	Streptococcus pneumoniae SP18-BS74
Length:	214 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|149007790, gi....

Description	E-value	Query Range	Subject Range
gi\|221231641, gi... - gi\|221231641\|ref\|YP_002510793.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae ATCC 70... gi\|225856527, gi... - gi\|225856527\|ref\|YP_002738038.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae P1031], gi\|22572... PCP1_STRPN - Pyrrolidone-carboxylate peptidase 1 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TI... gi\|225728134, gi... - gi\|225861246\|ref\|YP_002742755.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae Taiwan19F-14], g... gi\|225854366, gi... - gi\|225854366\|ref\|YP_002735878.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae JJA], gi\|2257239... gi\|168493014, gi... - gi\|183577052\|gb\|EDT97580.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae CDC3059-06], gi\|16849... PCP_STRP2 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN... gi\|168575516, gi... - gi\|183578623\|gb\|EDT99151.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae MLV-016], gi\|16857551... PCP_STRPI - Pyrrolidone-carboxylate peptidase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=pcp PE=3 SV=1 gi\|237822246 - gi\|237822246\|ref\|ZP_04598091.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae CCRI 197... gi\|182629108, gi... - gi\|182683774\|ref\|YP_001835521.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae CGSP14]... gi\|242245140, gi... - gi\|242245140\|ref\|ZP_04799577.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae TCH8431/... gi\|148993672, gi... - gi\|148993672\|ref\|ZP_01823119.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae SP9-BS68... gi\|172042083, gi... - gi\|172042083\|gb\|EDT50129.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae CDC1873-00], gi\|16848... gi\|147925960, gi... - gi\|148988279\|ref\|ZP_01819726.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae SP6-BS73... gi\|168485808, gi... - gi\|183571051\|gb\|EDT91579.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae CDC1087-00], gi\|16848... gi\|147922981, gi... - gi\|148984590\|ref\|ZP_01817858.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae SP3-BS71... gi\|183571351, gi... - gi\|183571351\|gb\|EDT91879.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae SP195], gi\|168490293\|... gi\|183574584, gi... - gi\|183574584\|gb\|EDT95112.1\| pyroglutamyl-peptidase I [Streptococcus pneumoniae CDC0288-04], gi\|16849... PCP1_STRR6 - Pyrrolidone-carboxylate peptidase 1 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pcp1 P... PCP1_STRPN - Pyrrolidone-carboxylate peptidase 1 OS=Streptococcus pneumoniae GN=pcp1 PE=3 SV=1 gi\|147764991, gi... - gi\|149010510\|ref\|ZP_01831881.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae SP19-BS7... gi\|149007196, gi... - gi\|149007196\|ref\|ZP_01830860.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae SP18-BS7... gi\|147756764, gi... - gi\|148997064\|ref\|ZP_01824718.1\| pyrrolidone-carboxylate peptidase [Streptococcus pneumoniae SP11-BS7...	318.0	[0..1]	[214..1]
gi\|23003163 - gi\|23003163\|ref\|ZP_00046831.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p... PCP_LACGA - Pyrrolidone-carboxylate peptidase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243 / JCM 1131... gi\|226820393 - gi\|226820393\|ref\|ZP_03809512.1\| pyrrolidone-carboxylate peptidase [Lactobacillus gasseri MV-22]	310.0	[0..1]	[214..1]
PCP_STRP1 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M1 GN=pcp PE=3 SV=1 PCP_STRPZ - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=pcp PE=3 ... PCP_STRPM - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M28 GN=pcp PE=3 SV=1 PCP_STRPY - (Q01328) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) (5-oxoprolyl-peptidase) (Pyroglutamyl-pepti... PCP_STRP6 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS1... gi\|15674611, gi\|... - gi\|15674611\|ref\|NP_268785.1\| pyrrolidone-carboxylate peptidase [Streptococcus pyogenes M1 GAS], gi\|1... PCP_STRPD - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=pcp PE... PCP_STRP6 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M6 GN=pcp PE=1 SV=1 gi\|71853012, gi\|... - gi\|71910230\|ref\|YP_281780.1\| pyrrolidone-carboxylate peptidase [Streptococcus pyogenes MGAS5005], gi... PCP_STRPM - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M28 (strain MGAS6180) GN=pcp PE... gi\|56808173 - gi\|56808173\|ref\|ZP_00365954.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p... PCP_STRPG - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=pcp PE=...	306.0	[0..1]	[214..1]
PCP_STRPF - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=pcp PE... PCP_STRP8 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=pcp PE... PCP_STRP8 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M18 GN=pcp PE=3 SV=1	306.0	[0..1]	[214..1]
PCP_STRP3 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M3 GN=pcp PE=3 SV=1 PCP_STRP3 - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS3... PCP_STRPQ - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=pcp PE=3 S...	306.0	[0..1]	[214..1]
PCP_LACJO - Pyrrolidone-carboxylate peptidase OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) G... PCP_LACJO - Pyrrolidone-carboxylate peptidase OS=Lactobacillus johnsonii GN=pcp PE=3 SV=1	306.0	[0..1]	[214..1]
PCP_STRPC - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=pcp PE... PCP_STRPB - Pyrrolidone-carboxylate peptidase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=pcp PE...	305.0	[0..1]	[214..1]
PCP_BACC1 - Pyrrolidone-carboxylate peptidase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=pcp PE=3 SV=1	301.0	[0..1]	[214..1]
gi\|165868832, gi... - gi\|165868832\|ref\|ZP_02213492.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. A0488], g... gi\|167514871, gi... - gi\|167637364\|ref\|ZP_02395644.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. A0193], g... gi\|170705179, gi... - gi\|170705179\|ref\|ZP_02895644.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. A0389], g... gi\|172084061, gi... - gi\|177650109\|ref\|ZP_02933110.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. A0174], g... gi\|190564734, gi... - gi\|190564734\|ref\|ZP_03017655.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis Tsiankovskii-I... gi\|49179808, gi\|... - gi\|49185881\|ref\|YP_029133.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Sterne], gi\|... gi\|50196941, gi\|... - gi\|50196941\|ref\|YP_052632.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. 'Ames Ancest... gi\|254760929 - gi\|254760929\|ref\|ZP_05212953.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Australia... gi\|254752412 - gi\|254752412\|ref\|ZP_05204448.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Vollum] gi\|254738096 - gi\|254738096\|ref\|ZP_05195799.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Western N... PCP_BACAA - Pyrrolidone-carboxylate peptidase OS=Bacillus anthracis (strain A0248) GN=pcp PE=3 SV=1 gi\|229145672, gi... - gi\|229145672\|ref\|ZP_04274055.1\| Pyrrolidone-carboxylate peptidase [Bacillus cereus BDRD-ST24], gi\|22... gi\|228928140, gi... - gi\|228928140\|ref\|ZP_04091184.1\| Pyrrolidone-carboxylate peptidase [Bacillus thuringiensis serovar po... gi\|30257673, gi\|... - gi\|30263040\|ref\|NP_845417.1\| pyrrolidone-carboxylate peptidase [Bacillus anthracis str. Ames], gi\|30... gi\|228915662, gi... - gi\|228915662\|ref\|ZP_04079249.1\| Pyrrolidone-carboxylate peptidase [Bacillus thuringiensis serovar pu... gi\|65320351, gi\|... - gi\|65320351\|ref\|ZP_00393310.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl p... PCP_BACAC - Pyrrolidone-carboxylate peptidase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=pcp PE=3 SV=... gi\|206974548, gi... - gi\|206974548\|ref\|ZP_03235464.1\| pyrrolidone-carboxylate peptidase [Bacillus cereus H3081.97], gi\|206... PCP_BACC7 - Pyrrolidone-carboxylate peptidase OS=Bacillus cereus (strain AH187) GN=pcp PE=3 SV=1 PCP_BACAN - Pyrrolidone-carboxylate peptidase OS=Bacillus anthracis GN=pcp PE=1 SV=1	300.0	[0..1]	[214..1]
gi\|227552185, gi... - gi\|227552185\|ref\|ZP_03982234.1\| pyroglutamyl-peptidase I [Enterococcus faecium TX1330], gi\|227178676... gi\|68196059, gi\|... - gi\|69245058\|ref\|ZP_00603216.1\| Peptidase C15, pyroglutamyl peptidase I [Enterococcus faecium DO], gi... gi\|293571505\|ref... - pyroglutamyl-peptidase I [Enterococcus faecium E980] gi\|48825931 - ref\|ZP_00287167.1\| COG2039: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) [E...	299.0	[0..1]	[214..1]

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Predicted Domain #1

Region A:
Residues: [1-214]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLVTGFEP FGGEKGNPAL EAIKGLPAEI HGAEVRWLEV PTVFHKSAQV LEEEMNRYQP  60
   61 DFVLCIGQAG GRTSLTPERV TINQDDACIS DNEDNQPIDR PIRPDGASAY FSSLPIKAMV 120
  121 QAIKKEGLPA SVSNTAGTFV CSHLMYQALY LVEKKSPYVK AGFMHIPYMM EQVVNRPTTP 180
  181 AMSLVDIRRG IEAAIGAIIE HGDQELKLVG GETH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.045757
Match:	1augA
Description:	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits