YRC Public Data Repository - Protein Structure Prediction

Protein:	YEGS_SHIFL
Organism:	Shigella flexneri
Length:	299 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YEGS_SHIFL.

Description	E-value	Query Range	Subject Range
gi\|23098222, gi\|... - gi\|23098222\|ref\|NP_691688.1\| putative lipid kinase [Oceanobacillus iheyensis HTE831], gi\|22776447\|db...	277.0	[0..4]	[294..1]
gi\|165871371, gi... - gi\|165871371\|ref\|ZP_02216019.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis str. A0... gi\|167530399, gi... - gi\|167634085\|ref\|ZP_02392407.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis str. A0... gi\|170126326, gi... - gi\|170708747\|ref\|ZP_02899184.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis str. A0... gi\|172081283, gi... - gi\|177653703\|ref\|ZP_02935842.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis str. A0... gi\|167640136, gi... - gi\|167640136\|ref\|ZP_02398403.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis str. A0... gi\|170667706, gi... - gi\|170688374\|ref\|ZP_02879583.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis str. A0... gi\|65317745 - gi\|65317745\|ref\|ZP_00390704.1\| COG1597: Sphingosine kinase and enzymes related to eukaryotic diacylg... gi\|49479061, gi\|... - gi\|49479061\|ref\|YP_034641.1\| putative lipid kinase [Bacillus thuringiensis serovar konkukian str. 97... gi\|228913050, gi... - gi\|228913050\|ref\|ZP_04076689.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar pulsiensis BGS... gi\|227003981, gi... - gi\|227812988\|ref\|YP_002812997.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis str. C... gi\|228931813, gi... - gi\|228931813\|ref\|ZP_04094709.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar andalousiensis... gi\|228834044, gi... - gi\|228925566\|ref\|ZP_04088655.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar pondicheriensi... gi\|228629355, gi... - gi\|229154075\|ref\|ZP_04282200.1\| Diacylglycerol kinase [Bacillus cereus ATCC 4342], gi\|228629355\|gb\|E... gi\|228776159, gi... - gi\|228983563\|ref\|ZP_04143768.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar tochigiensis B... gi\|49183336, gi\|... - gi\|49183336\|ref\|YP_026588.1\| putative lipid kinase [Bacillus anthracis str. Sterne], gi\|49177263\|gb\|... gi\|254686706 - gi\|254686706\|ref\|ZP_05150564.1\| putative lipid kinase [Bacillus anthracis str. CNEVA-9066] gi\|47500737, gi\|... - gi\|47525589\|ref\|YP_016938.1\| putative lipid kinase [Bacillus anthracis str. 'Ames Ancestor'], gi\|475... gi\|229267491, gi... - gi\|229603083\|ref\|YP_002864938.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis str. A... gi\|30260493, gi\|... - gi\|30260493\|ref\|NP_842870.1\| putative lipid kinase [Bacillus anthracis str. Ames], gi\|30253861\|gb\|AA... gi\|254761902 - gi\|254761902\|ref\|ZP_05213751.1\| putative lipid kinase [Bacillus anthracis str. Australia 94] gi\|254724781 - gi\|254724781\|ref\|ZP_05186564.1\| putative lipid kinase [Bacillus anthracis str. A1055] gi\|190561310, gi... - gi\|190567523\|ref\|ZP_03020436.1\| conserved hypothetical protein TIGR00147 [Bacillus anthracis Tsianko... gi\|218901513, gi... - gi\|218901513\|ref\|YP_002449347.1\| conserved hypothetical protein TIGR00147 [Bacillus cereus AH820], g...	266.0	[0..4]	[293..2]
gi\|52144926, gi\|... - gi\|52144926\|ref\|YP_081903.1\| putative lipid kinase [Bacillus cereus E33L], gi\|51978395\|gb\|AAU19945.1... gi\|196040085, gi... - gi\|196040085\|ref\|ZP_03107387.1\| conserved hypothetical protein TIGR00147 [Bacillus cereus NVH0597-99... gi\|228693914, gi... - gi\|229089437\|ref\|ZP_04220708.1\| Diacylglycerol kinase [Bacillus cereus Rock3-42], gi\|228693914\|gb\|EE...	266.0	[0..4]	[293..2]
gi\|228853492, gi... - gi\|228906083\|ref\|ZP_04069972.1\| Diacylglycerol kinase [Bacillus thuringiensis IBL 200], gi\|228853492... gi\|228899038, gi... - gi\|228899038\|ref\|ZP_04063311.1\| Diacylglycerol kinase [Bacillus thuringiensis IBL 4222], gi\|22886061... gi\|228937602, gi... - gi\|228937602\|ref\|ZP_04100240.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar berliner ATCC ... gi\|228840350, gi... - gi\|228919243\|ref\|ZP_04082613.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar huazhongensis ... gi\|228956740, gi... - gi\|228956740\|ref\|ZP_04118526.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar pakistani str.... gi\|228808793, gi... - gi\|228950864\|ref\|ZP_04112987.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar kurstaki str. ... gi\|228970489, gi... - gi\|228970489\|ref\|ZP_04131140.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar thuringiensis ... gi\|228963403, gi... - gi\|228963403\|ref\|ZP_04124564.1\| Diacylglycerol kinase [Bacillus thuringiensis serovar sotto str. T04... gi\|229042205, gi... - gi\|229042205\|ref\|ZP_04189959.1\| Diacylglycerol kinase [Bacillus cereus AH676], gi\|228727140\|gb\|EEL78... gi\|228782675, gi... - gi\|228977058\|ref\|ZP_04137461.1\| Diacylglycerol kinase [Bacillus thuringiensis Bt407], gi\|228782675\|g... gi\|228705608, gi... - gi\|229077667\|ref\|ZP_04210297.1\| Diacylglycerol kinase [Bacillus cereus Rock4-2], gi\|228705608\|gb\|EEL... gi\|228715071, gi... - gi\|229068063\|ref\|ZP_04201371.1\| Diacylglycerol kinase [Bacillus cereus F65185], gi\|228715071\|gb\|EEL6... gi\|229125804, gi... - gi\|229125804\|ref\|ZP_04254830.1\| Diacylglycerol kinase [Bacillus cereus BDRD-Cer4], gi\|228657661\|gb\|E... gi\|229107979, gi... - gi\|229107979\|ref\|ZP_04237606.1\| Diacylglycerol kinase [Bacillus cereus Rock1-15], gi\|228675482\|gb\|EE... gi\|229148710, gi... - gi\|229148710\|ref\|ZP_04276960.1\| Diacylglycerol kinase [Bacillus cereus m1550], gi\|228634718\|gb\|EEK91... gi\|229143105, gi... - gi\|229143105\|ref\|ZP_04271538.1\| Diacylglycerol kinase [Bacillus cereus BDRD-ST24], gi\|228640378\|gb\|E... gi\|218541003, gi... - gi\|218895429\|ref\|YP_002443840.1\| hypothetical protein BCG9842_B4951 [Bacillus cereus G9842], gi\|2185... gi\|229188578, gi... - gi\|229188578\|ref\|ZP_04315617.1\| Diacylglycerol kinase [Bacillus cereus ATCC 10876], gi\|228594767\|gb\|... gi\|206737044, gi... - gi\|206968124\|ref\|ZP_03229080.1\| conserved hypothetical protein TIGR00147 [Bacillus cereus AH1134], g... gi\|218231185, gi... - gi\|218231185\|ref\|YP_002365151.1\| conserved hypothetical protein TIGR00147 [Bacillus cereus B4264], g... gi\|75760016, gi\|... - gi\|75760016\|ref\|ZP_00740082.1\| Diacylglycerol kinase family [Bacillus thuringiensis serovar israelen... gi\|29894102, gi\|... - gi\|30018561\|ref\|NP_830192.1\| putative lipid kinase [Bacillus cereus ATCC 14579], gi\|29894102\|gb\|AAP0...	266.0	[0..4]	[293..2]
gi\|152974141, gi... - gi\|89200055\|ref\|ZP_01178811.1\| Conserved hypothetical protein 147 [Bacillus cereus subsp. cytotoxis ...	265.0	[0..4]	[293..2]
gi\|217957881, gi... - gi\|217957881\|ref\|YP_002336425.1\| conserved hypothetical protein TIGR00147 [Bacillus cereus AH187], g... gi\|206974307, gi... - gi\|206974307\|ref\|ZP_03235224.1\| conserved hypothetical protein TIGR00147 [Bacillus cereus H3081.97],... gi\|42735349, gi\|... - gi\|42779433\|ref\|NP_976680.1\| putative lipid kinase [Bacillus cereus ATCC 10987], gi\|42735349\|gb\|AAS3... gi\|229194696, gi... - gi\|229194696\|ref\|ZP_04321489.1\| Diacylglycerol kinase [Bacillus cereus m1293], gi\|228588799\|gb\|EEK46... gi\|229137148, gi... - gi\|229137148\|ref\|ZP_04265767.1\| Diacylglycerol kinase [Bacillus cereus BDRD-ST26], gi\|228646320\|gb\|E...	265.0	[0..4]	[293..2]
gi\|89088423, gi\|... - gi\|89097043\|ref\|ZP_01169934.1\| hypothetical protein B14911_19100 [Bacillus sp. NRRL B-14911], gi\|890...	265.0	[0..1]	[294..14]
gi\|229131310, gi... - gi\|229131310\|ref\|ZP_04260211.1\| Diacylglycerol kinase [Bacillus cereus BDRD-ST196], gi\|228652131\|gb\|... gi\|229055148, gi... - gi\|229055148\|ref\|ZP_04195576.1\| Diacylglycerol kinase [Bacillus cereus AH603], gi\|228721224\|gb\|EEL72... gi\|229165288, gi... - gi\|229165288\|ref\|ZP_04293075.1\| Diacylglycerol kinase [Bacillus cereus AH621], gi\|228618113\|gb\|EEK75... gi\|89157406, gi\|... - gi\|89204779\|ref\|ZP_01183355.1\| Conserved hypothetical protein 147 [Bacillus weihenstephanensis KBAB4... gi\|229009806, gi... - gi\|229009806\|ref\|ZP_04167026.1\| Diacylglycerol kinase [Bacillus mycoides DSM 2048], gi\|228751424\|gb\|...	263.0	[0..4]	[293..2]
gi\|25381547 - pir\|\|D83734 hypothetical protein BH0676 [imported] - Bacillus halodurans (strain C-125) gi\|15613239, gi\|... - gi\|15613239\|ref\|NP_241542.1\| putative lipid kinase [Bacillus halodurans C-125], gi\|10173290\|dbj\|BAB0...	263.0	[0..4]	[294..1]
DAGK_BACSU - Diacylglycerol kinase OS=Bacillus subtilis GN=dagK PE=1 SV=1 DAGK_BACSU - Diacylglycerol kinase OS=Bacillus subtilis (strain 168) GN=dagK PE=1 SV=1 gi\|221312832 - gi\|221312832\|ref\|ZP_03594637.1\| putative lipid kinase [Bacillus subtilis subsp. subtilis str. NCIB 3... gi\|221317756 - gi\|221317756\|ref\|ZP_03599050.1\| putative lipid kinase [Bacillus subtilis subsp. subtilis str. JH642] gi\|221322035 - gi\|221322035\|ref\|ZP_03603329.1\| putative lipid kinase [Bacillus subtilis subsp. subtilis str. SMY]	260.0	[0..4]	[294..1]

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Predicted Domain #1

Region A:
Residues: [1-299]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEFPASLLI LNGKSTDNLP LREAIMLLRE EGMTIHVRVT WEKGDAARFV EEARKLGVAT  60
   61 VIAGGGDGTI NEVCTALIQC EGDDIPALGI LPLGTANDFA TSVGIPEALD KALKLAIAGN 120
  121 AIAIDMAQVN KQTCFINMAT GGFGTRITTE TPEKLKAALG GVSYIIHGLM RMDTLQPDRC 180
  181 EIRGENFHWQ GDALVIGIGN GRQAGGGQQL CPNALINDGL LQLRIFTGDE ILPALVSTLK 240
  241 SDEDNPNIIE GASSWFDIQA PHEITFNLDG EPLSGQNFHI EILPAALRCR LPPDCPLLR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	69.09691
Match:	2bonA
Description:	No description for 2bonA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits