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View Structure Prediction Details

Protein: FRDC_WOLSU
Organism: Wolinella succinogenes
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRDC_WOLSU.

Description E-value Query
Range
Subject
Range
gi|157874498, gi... - gi|157874498|pdb|1E7P|L Chain L, Quinol:fumarate Reductase From Wolinella Succinogenes, gi|157874496...
287.0 [0..1] [256..1]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNESILESY SGVTPERKKS RMPAKLDWWQ SATGLFLGLF MIGHMFFVST ILLGDNVMLW  60
   61 VTKKFELDFI FEGGKPIVVS FLAAFVFAVF IAHAFLAMRK FPINYRQYLT FKTHKDLMRH 120
  121 GDTTLWWIQA MTGFAMFFLG SVHLYIMMTQ PQTIGPVSSS FRMVSEWMWP LYLVLLFAVE 180
  181 LHGSVGLYRL AVKWGWFDGE TPDKTRANLK KLKTLMSAFL IVLGLLTFGA YVKKGLEQTD 240
  241 PNIDYKYFDY KRTHHR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.09691
Match: 1qlbC
Description: Fumarate reductase respiratory complex cytochrome b subunit, FrdC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
succinate dehydrogenase activity 10.6133558935785 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 7.24661342841192 bayes_pls_golite062009
oxidoreductase activity 5.99989196344185 bayes_pls_golite062009
electron carrier activity 4.50772505551128 bayes_pls_golite062009
catalytic activity 0.971825536251904 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle