YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FLXA_ECOLI
Organism: Escherichia coli
Length: 110 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLXA_ECOLI.

Description E-value Query
Range
Subject
Range
gi|83587909 - gi|83587909|ref|ZP_00926535.1| hypothetical protein Ecol1_01000940 [Escherichia coli 101-1]
91.0 [0..48] [110..1]

Back

Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVTIQGNTS TVISNNSAPE GTSEIAKITR QIQVLTEKLG KISSEEGMTT QQKKEMAALV  60
   61 QKQIESLWAQ LEQLLRQQAE KKNEDATVQP DKKEEKKDDT NTAGTIDIYV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.927 f.17.1 F1F0 ATP synthase subunit C
View Download 0.870 a.7.7 BAG domain
View Download 0.870 a.7.7 BAG domain
View Download 0.865 a.7.7 BAG domain
View Download 0.865 a.7.7 BAG domain
View Download 0.826 d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.814 a.2.6 Effector domain of the protein kinase pkn/prk1
View Download 0.804 a.7.7 BAG domain
View Download 0.804 a.7.7 BAG domain
View Download 0.787 a.24.9 alpha-catenin/vinculin
View Download 0.589 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.351 a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.301 a.37.1 A DNA-binding domain in eukaryotic transcription factors
View Download 0.284 d.67.3 Ribosome recycling factor, RRF
View Download 0.264 a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle