YRC Public Data Repository - Protein Structure Prediction

Protein:	FLIE_THEMA
Organism:	Thermotoga maritima
Length:	94 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLIE_THEMA.

Description	E-value	Query Range	Subject Range
gi\|58582223, gi\|... - gi\|58582223\|ref\|YP_201239.1\| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331], gi\|5842681...	96.0	[0..3]	[94..82]
gi\|37199415, gi\|... - gi\|37680666\|ref\|NP_935275.1\| flagellar hook-basal body protein [Vibrio vulnificus YJ016], gi\|3719941...	94.0	[0..4]	[94..28]
FLIE_OCEIH - Flagellar hook-basal body complex protein fliE OS=Oceanobacillus iheyensis GN=fliE PE=3 SV=1 FLIE_OCEIH - Flagellar hook-basal body complex protein FliE OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 1...	93.0	[0..1]	[94..6]
gi\|48859237, gi\|... - gi\|67875409\|ref\|ZP_00504749.1\| Flagellar hook-basal body complex protein FliE [Clostridium thermocel...	92.0	[0..2]	[94..13]
gi\|221562890, gi... - gi\|222053601\|ref\|YP_002535963.1\| flagellar hook-basal body complex subunit FliE [Geobacter sp. FRC-3...	92.0	[0..16]	[94..24]
FLIE_DESHD - Flagellar hook-basal body complex protein FliE OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 1...	92.0	[0..3]	[94..25]
gi\|20807890, gi\|... - gi\|20807890\|ref\|NP_623061.1\| flagellar hook-basal body protein FliE [Thermoanaerobacter tengcongensi... gi\|20807890 - gi\|20807890\|ref\|NP_623061.1\| Flagellar hook-basal body protein [Thermoanaerobacter tengcongensis MB4...	92.0	[0..1]	[94..1]
gi\|83572536, gi\|... - gi\|83589622\|ref\|YP_429631.1\| flagellar hook-basal body complex protein (FliE) [Moorella thermoacetic...	92.0	[0..1]	[94..10]
gi\|88934000, gi\|... - gi\|88934000\|ref\|ZP_01139644.1\| Flagellar hook-basal body complex protein FliE [Geobacter uraniumredu...	92.0	[0..19]	[94..27]
FLIE_DESHY - Flagellar hook-basal body complex protein FliE OS=Desulfitobacterium hafniense (strain Y51) GN=fliE ...	91.0	[0..3]	[94..25]

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Predicted Domain #1

Region A:
Residues: [1-94]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDRIEGLGP LSQSGKTQKK SENNFSEALK EALEKVNDIQ KKAEKAADDF AQGRISNIHE  60
   61 VIIEAEKASI ALRLTVEVRN RIVEAYRDIM RMQI

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	49.080922
Match:	PF02049.9
Description:	No description for PF02049.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.977	N/A	N/A	a.7.2	Enzyme IIa from lactose specific PTS, IIa-lac

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits