YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGN_YEREN
Organism:	Yersinia enterocolitica
Length:	147 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGN_YEREN.

Description	E-value	Query Range	Subject Range
gi\|22126397, gi\|... - gi\|22126397\|ref\|NP_669820.1\| flagellar biosynthesis protein [Yersinia pestis KIM], gi\|21959384\|gb\|AA... gi\|89105478 - gi\|89105478\|ref\|ZP_01177997.1\| COG3418: Flagellar biosynthesis/type III secretory pathway chaperone ... gi\|45436276, gi\|... - gi\|45441415\|ref\|NP_992954.1\| flagella synthesis protein FlgN [Yersinia pestis biovar Microtus str. 9...	132.0	[0..1]	[147..1]
gi\|186895108, gi... - gi\|186895108\|ref\|YP_001872220.1\| FlgN family protein [Yersinia pseudotuberculosis PB1/+], gi\|1866981... gi\|166010810, gi... - gi\|166010810\|ref\|ZP_02231708.1\| flagella synthesis protein FlgN [Yersinia pestis biovar Antiqua str.... gi\|166210734, gi... - gi\|166210734\|ref\|ZP_02236769.1\| flagella synthesis protein FlgN [Yersinia pestis biovar Antiqua str.... gi\|167055190, gi... - gi\|167425791\|ref\|ZP_02317544.1\| flagella synthesis protein FlgN [Yersinia pestis biovar Mediaevalis ... gi\|167469713 - gi\|167469713\|ref\|ZP_02334417.1\| flagella synthesis protein FlgN [Yersinia pestis FV-1] gi\|229902871, gi... - gi\|229902871\|ref\|ZP_04517988.1\| flagella synthesis protein FlgN [Yersinia pestis Nepal516], gi\|22968... gi\|165922186, gi... - gi\|165925982\|ref\|ZP_02221814.1\| flagella synthesis protein FlgN [Yersinia pestis biovar Orientalis s... gi\|108807167, gi... - gi\|108807167\|ref\|YP_651083.1\| flagella synthesis protein FlgN [Yersinia pestis Antiqua], gi\|10877908... gi\|165938695, gi... - gi\|165938695\|ref\|ZP_02227250.1\| flagella synthesis protein FlgN [Yersinia pestis biovar Orientalis s... gi\|51589287, gi\|... - gi\|51596005\|ref\|YP_070196.1\| flagella synthesis protein FlgN [Yersinia pseudotuberculosis IP 32953],... gi\|25324898 - pir\|\|AI0218 flagella synthesis protein FlgN [imported] - Yersinia pestis (strain CO92) gi\|15979819, gi\|... - gi\|218928916\|ref\|YP_002346791.1\| flagella synthesis protein FlgN [Yersinia pestis CO92], gi\|16122048... gi\|149292670, gi... - gi\|149366257\|ref\|ZP_01888292.1\| flagella synthesis protein FlgN [Yersinia pestis CA88-4125], gi\|1492... gi\|145598616, gi... - gi\|145598616\|ref\|YP_001162692.1\| flagella synthesis protein FlgN [Yersinia pestis Pestoides F], gi\|1... gi\|229701159, gi... - gi\|229896236\|ref\|ZP_04511406.1\| flagella synthesis protein FlgN [Yersinia pestis Pestoides A], gi\|22... Q66BU8\|Q66BU8_YERPS - Flagella synthesis protein FlgN - Yersinia pseudotuberculosis gi\|229897171, gi... - gi\|229897171\|ref\|ZP_04512327.1\| flagella synthesis protein FlgN [Yersinia pestis biovar Orientalis s... gi\|229688938, gi... - gi\|229897897\|ref\|ZP_04513048.1\| flagella synthesis protein FlgN [Yersinia pestis biovar Orientalis s...	130.0	[0..2]	[147..1]
gi\|77979942, gi\|... - gi\|77979942\|ref\|ZP_00835358.1\| COG3418: Flagellar biosynthesis/type III secretory pathway chaperone ...	129.0	[0..1]	[147..1]
gi\|793896, gi\|10... - gi\|793896\|emb\|CAA88189.1\| flgN [Yersinia enterocolitica], gi\|1073719\|pir\|\|S54217 flgN protein - Yers...	129.0	[0..2]	[147..1]
gi\|77628868, gi\|... - gi\|77628868\|ref\|ZP_00791454.1\| COG3418: Flagellar biosynthesis/type III secretory pathway chaperone ...	127.0	[0..1]	[147..1]
gi\|49611159, gi\|... - gi\|50120633\|ref\|YP_049800.1\| flagella synthesis protein [Pectobacterium atrosepticum SCRI1043], gi\|4...	126.0	[0..3]	[145..1]
gi\|77975732 - gi\|77975732\|ref\|ZP_00831266.1\| COG3418: Flagellar biosynthesis/type III secretory pathway chaperone ...	125.0	[0..2]	[147..1]
gi\|77957058 - gi\|77957058\|ref\|ZP_00821125.1\| COG3418: Flagellar biosynthesis/type III secretory pathway chaperone ...	125.0	[0..1]	[147..1]
gi\|238799101, gi... - gi\|77960289\|ref\|ZP_00824168.1\| COG3418: Flagellar biosynthesis/type III secretory pathway chaperone ...	122.0	[0..2]	[147..1]

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Predicted Domain #1

Region A:
Residues: [1-147]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVERLQTNL DQQLELLESL KTVVAQEQQL LCSGRIQGIV LQGVTEQKSS ILATLAYLDQ  60
   61 TRLTTEKNIN IQAPYSNVPA LAEAWQRILE LAEGLRYGNL HNGLLLQQHI EHNTQALAVL 120
  121 YTPHGQSLYG PDGHAKGASL LGRKIGI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.522879
Match:	2fupA
Description:	Crystal structure of hypothetical protein PA3352 from Pseudomonas aeruginosa at 1.48 A resolution
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits