YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGI_ECOLI
Organism:	Escherichia coli
Length:	365 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGI_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|95111825 - gi\|95111825\|emb\|CAK16549.1\| flagellar basal P-ring protein [Pseudomonas entomophila L48] FLGI_PSEE4 - Flagellar P-ring protein OS=Pseudomonas entomophila (strain L48) GN=flgI PE=3 SV=1	565.0	[0..2]	[365..5]
tr\|E4RB16\|E4RB16... - Flagellar P-ring protein OS=Pseudomonas putida (strain BIRD-1) GN=flgI PE=3 SV=1 gi\|148510769, gi... - gi\|148546711\|ref\|YP_001266813.1\| flagellar basal body P-ring protein [Pseudomonas putida F1], gi\|148... tr\|I7C516\|I7C516... - Flagellar P-ring protein OS=Pseudomonas putida (strain DOT-T1E) GN=flgI PE=3 SV=1 FLGI_PSEPK - Flagellar P-ring protein OS=Pseudomonas putida (strain KT2440) GN=flgI PE=3 SV=1	562.0	[0..1]	[365..4]
gi\|82715212, gi\|... - gi\|82737694\|ref\|ZP_00900540.1\| flagellar P-ring protein precursor FlgI [Pseudomonas putida F1], gi\|8...	562.0	[0..1]	[365..6]
gi\|94427544, gi\|... - gi\|94500245\|ref\|ZP_01306778.1\| Flagellar basal-body P-ring protein [Oceanobacter sp. RED65], gi\|9442...	554.0	[0..2]	[365..1]
gi\|194545205, gi... - gi\|84322076\|ref\|ZP_00970421.1\| COG1706: Flagellar basal-body P-ring protein [Pseudomonas aeruginosa ... FLGI_PSEAB - Flagellar P-ring protein OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=flgI PE=3 SV=1 FLGI_PSEAE - Flagellar P-ring protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12... gi\|126192820, gi... - gi\|84328546\|ref\|ZP_00976550.1\| COG1706: Flagellar basal-body P-ring protein [Pseudomonas aeruginosa ... FLGI_PSEAE - Flagellar P-ring protein OS=Pseudomonas aeruginosa GN=flgI PE=3 SV=1 FLGI_PSEA8 - Flagellar P-ring protein OS=Pseudomonas aeruginosa (strain LESB58) GN=flgI PE=3 SV=1 FLGI_PSEA7 - Flagellar P-ring protein OS=Pseudomonas aeruginosa (strain PA7) GN=flgI PE=3 SV=1 gi\|107100529 - gi\|107100529\|ref\|ZP_01364447.1\| hypothetical protein PaerPA_01001554 [Pseudomonas aeruginosa PACS2]	554.0	[0..20]	[365..23]
gi\|94415942 - gi\|94415942\|ref\|ZP_01295774.1\| hypothetical protein PaerP_01002271 [Pseudomonas aeruginosa PA7]	554.0	[0..20]	[365..26]
gi\|49086284 - gi\|49086284\|gb\|AAT51341.1\| PA1084 [synthetic construct]	554.0	[0..20]	[365..23]
FLGI_PSEPF - Flagellar P-ring protein OS=Pseudomonas fluorescens (strain Pf0-1) GN=flgI PE=3 SV=1	553.0	[0..17]	[365..13]
gi\|213967577, gi... - gi\|213967577\|ref\|ZP_03395725.1\| flagellar P-ring protein FlgI [Pseudomonas syringae pv. tomato T1], ... FLGI_PSESM - Flagellar P-ring protein OS=Pseudomonas syringae pv. tomato GN=flgI PE=3 SV=1 FLGI_PSESM - Flagellar P-ring protein OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=flgI PE=3 SV=1	551.0	[0..1]	[365..4]
FLGI_PSEF5 - Flagellar P-ring protein OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=flgI PE=3 SV=1	551.0	[0..6]	[365..2]

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Predicted Domain #1

Region A:
Residues: [1-180]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKFLSALIL LLVTTAAQAE RIRDLTSVQG VRQNSLIGYG LVVGLDGTGD QTTQTPFTTQ  60
   61 TLNNMLSQLG ITVPTGTNMQ LKNVAAVMVT ASLPPFGRQG QTIDVVVSSM GNAKSLRGGT 120
  121 LLMTPLKGVD SQVYALAQGN ILVGGAGASA GGSSVQVNQL NGGRITNGAV IERELPSQFG 180
  181

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [181-246]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGNTLNLQLN DEDFSMAQQI ADTINRVRGY GSATALDART IQVRVPSGNS SQVRFLADIQ  60
   61 NMQVNV

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [247-365]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPQDAKVVIN SRTGSVVMNR EVTLDSCAVA QGNLSVTVNR QANVSQPDTP FGGGQTVVTP  60
   61 QTQIDLRQSG GSLQSVRSSA SLNNVVRALN ALGATPMDLM SILQSMQSAG CLRAKLEII

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits