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View Structure Prediction Details

Protein: FLGG_ECOLI
Organism: Escherichia coli
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGG_ECOLI.

Description E-value Query
Range
Subject
Range
gi|71484066, gi|... - gi|71550721|ref|ZP_00670810.1| Flagellar basal body rod protein:Protein of unknown function DUF1078 ...
249.0 [0..1] [260..1]
gi|67677244, gi|... - gi|92114096|ref|YP_574024.1| flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM 3043], g...
249.0 [0..1] [260..1]
gi|58582198, gi|... - gi|58582198|ref|YP_201214.1| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomon...
247.0 [0..1] [259..81]
gi|7443088 - pir||C70372 flagellar hook basal body protein flgG - Aquifex aeolicus
gi|15606190, gi|... - gi|2983377|gb|AAC06963.1| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5], gi|15606190...
246.0 [0..1] [260..1]
gi|86157777, gi|... - gi|86157777|ref|YP_464562.1| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C], gi...
246.0 [0..2] [260..7]
gi|89211345, gi|... - gi|89211345|ref|ZP_01189714.1| Protein of unknown function DUF1078 [Halothermothrix orenii H 168], g...
246.0 [0..1] [260..1]
gi|30138210, gi|... - gi|30248324|ref|NP_840394.1| flagellar basal body rod protein FlgG [Nitrosomonas europaea ATCC 19718...
245.0 [0..1] [260..1]
gi|4982109, gi|1... - gi|4982109|gb|AAD36609.1|AE001800_19 flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8...
gi|7443089 - pir||B72243 flagellar basal-body rod protein FlgG - Thermotoga maritima (strain MSB8)
gi|119886237, gi... - gi|148270380|ref|YP_001244840.1| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]...
243.0 [0..1] [260..1]
gi|238719166, gi... - gi|77960991|ref|ZP_00824841.1| COG4786: Flagellar basal body rod protein [Yersinia mollaretii ATCC 4...
243.0 [0..1] [260..1]
gi|82410520, gi|... - gi|82702455|ref|YP_412021.1| hypothetical protein Nmul_A1326 [Nitrosospira multiformis ATCC 25196], ...
241.0 [0..1] [260..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSLWIAKT GLDAQQTNMD VIANNLANVS TNGFKRQRAV FEDLLYQTIR QPGAQSSEQT  60
   61 TLPSGLQIGT GVRPVATERL HSQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.342 0.408 flagellum organization a.4.5 "Winged helix" DNA-binding domain
View Download 0.514 0.073 flagellum organization a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.368 0.026 flagellum organization a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.554 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.478 N/A N/A d.15.6 Superantigen toxins, C-terminal domain

Predicted Domain #2
Region A:
Residues: [84-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNLSQTNNSK DVAIKGQGFF QVMLPDGSSA YTRDGSFQVD QNGQLVTAGG FQVQPAITIP  60
   61 ANALSITIGR DGVVSVTQQG QAAPVQVGQL NLTTFMNDTG LESIGENLYT ETQSSGAPNE 120
  121 STPGLNGAGL LYQGYVETSN VNVAEELVNM IQVQRAYEIN SKAVSTTDQM LQKLTQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 1wlgA
Description: Crystal structure of FlgE31, a major fragment of the hook protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.879477893552599 bayes_pls_golite062009
protein binding 0.240895529492161 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle