YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGG_AGRFC
Organism:	Agrobacterium tumefaciens str. C58
Length:	262 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGG_AGRFC.

Description	E-value	Query Range	Subject Range
gi\|7443088 - pir\|\|C70372 flagellar hook basal body protein flgG - Aquifex aeolicus gi\|15606190, gi\|... - gi\|2983377\|gb\|AAC06963.1\| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5], gi\|15606190...	248.0	[0..2]	[262..3]
gi\|4982109, gi\|1... - gi\|4982109\|gb\|AAD36609.1\|AE001800_19 flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8... gi\|7443089 - pir\|\|B72243 flagellar basal-body rod protein FlgG - Thermotoga maritima (strain MSB8) gi\|119886237, gi... - gi\|148270380\|ref\|YP_001244840.1\| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]...	248.0	[0..1]	[262..2]
gi\|89211345, gi\|... - gi\|89211345\|ref\|ZP_01189714.1\| Protein of unknown function DUF1078 [Halothermothrix orenii H 168], g...	247.0	[0..3]	[262..4]
gi\|71484066, gi\|... - gi\|71550721\|ref\|ZP_00670810.1\| Flagellar basal body rod protein:Protein of unknown function DUF1078 ...	244.0	[0..2]	[260..3]
gi\|86157777, gi\|... - gi\|86157777\|ref\|YP_464562.1\| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C], gi...	244.0	[0..1]	[260..7]
gi\|67677244, gi\|... - gi\|92114096\|ref\|YP_574024.1\| flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM 3043], g...	243.0	[0..1]	[260..2]
gi\|58582198, gi\|... - gi\|58582198\|ref\|YP_201214.1\| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomon...	242.0	[0..2]	[259..83]
gi\|30138210, gi\|... - gi\|30248324\|ref\|NP_840394.1\| flagellar basal body rod protein FlgG [Nitrosomonas europaea ATCC 19718...	242.0	[0..2]	[260..3]
gi\|94427542, gi\|... - gi\|94500243\|ref\|ZP_01306776.1\| flagellar basal-body rod protein FlgG [Oceanobacter sp. RED65], gi\|94...	241.0	[0..2]	[259..3]
gi\|32262631, gi\|... - gi\|32266580\|ref\|NP_860612.1\| flagellar basal body rod protein FlgG [Helicobacter hepaticus ATCC 5144...	241.0	[0..1]	[262..2]

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Predicted Domain #1

Region A:
Residues: [1-262]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALAIAATG MDAQQTNLEV IANNIANINT TGYKRARAEF TDLLYQTERM QGVPNRANQA  60
   61 IVPEGANIGL GVQTSAVRNI HTQGNLIETG NKLDVAIIGQ GWFQIEAADG STLYSRAGAF 120
  121 NKNADGNLVT VDGYNVIPNI NIPTDAQDIT ITRTGQVTAR IGNAADFTQL GQLTIANFAN 180
  181 EAGLKPLGDN LFSQTPASGA PVVGVPDDPS YGYVKQSYLE GSNVDAVKEI TDLITAQRAY 240
  241 EMNSKVITTA DEMASIVSKN LK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	12.221849
Match:	1wlgA
Description:	Crystal structure of FlgE31, a major fragment of the hook protein
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits