YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGF_ECOLI
Organism:	Escherichia coli
Length:	251 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGF_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|4982109, gi\|1... - gi\|4982109\|gb\|AAD36609.1\|AE001800_19 flagellar basal-body rod protein FlgG [Thermotoga maritima MSB8... gi\|7443089 - pir\|\|B72243 flagellar basal-body rod protein FlgG - Thermotoga maritima (strain MSB8) gi\|119886237, gi... - gi\|148270380\|ref\|YP_001244840.1\| flagellar basal-body rod protein FlgG [Thermotoga petrophila RKU-1]...	246.0	[0..1]	[249..1]
gi\|7443088 - pir\|\|C70372 flagellar hook basal body protein flgG - Aquifex aeolicus gi\|15606190, gi\|... - gi\|2983377\|gb\|AAC06963.1\| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5], gi\|15606190...	237.0	[0..1]	[249..1]
gi\|166857307, gi... - gi\|76795949\|ref\|ZP_00778319.1\| Flagellar basal body rod protein:Protein of unknown function DUF1078 ... gi\|241884731, gi... - gi\|241902930\|ref\|ZP_04787660.1\| flagellar basal-body rod protein FlgG [Thermoanaerobacter brockii su...	237.0	[0..1]	[249..1]
gi\|242256821, gi... - gi\|242256821\|ref\|ZP_04801704.1\| flagellar basal-body rod FlgF family protein [Thermoanaerobacter sp.... gi\|166853024, gi... - gi\|167038784\|ref\|YP_001661769.1\| hypothetical protein Teth514_0111 [Thermoanaerobacter sp. X514], gi...	236.0	[0..1]	[249..1]
gi\|67677244, gi\|... - gi\|92114096\|ref\|YP_574024.1\| flagellar basal-body rod FlgG [Chromohalobacter salexigens DSM 3043], g...	235.0	[0..1]	[247..1]
gi\|89211345, gi\|... - gi\|89211345\|ref\|ZP_01189714.1\| Protein of unknown function DUF1078 [Halothermothrix orenii H 168], g...	235.0	[0..1]	[249..1]
gi\|86157777, gi\|... - gi\|86157777\|ref\|YP_464562.1\| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C], gi...	234.0	[0..2]	[248..7]
gi\|94731432, gi\|... - gi\|94987183\|ref\|YP_595116.1\| flagellar basal body rod protein FlgG [Lawsonia intracellularis PHE/MN1...	234.0	[0..1]	[249..1]
gi\|46448340, gi\|... - gi\|46578928\|ref\|YP_009736.1\| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris subsp. vu... gi\|241909539, gi... - gi\|241909539\|ref\|ZP_04794070.1\| flagellar basal-body rod protein FlgG [Desulfovibrio vulgaris RCH1],... gi\|120603471, gi... - gi\|120603471\|ref\|YP_967871.1\| flagellar basal body rod protein FlgG [Desulfovibrio vulgaris subsp. v...	234.0	[0..1]	[249..1]
gi\|114566479, gi... - gi\|114566479\|ref\|YP_753633.1\| flagellar basal-body rod protein FlgG [Syntrophomonas wolfei subsp. wo...	232.0	[0..1]	[249..1]

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Predicted Domain #1

Region A:
Residues: [1-251]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHAIYTAMG AASQTLNQQA VTASNLANAS TPGFRAQLNA LRAVPVEGLS LPTRTLVTAS  60
   61 TPGADMTPGK MDYTSRPLDV ALQQDGWLAV QTADGSEGYT RNGSIQVDPT GQLTIQGHPV 120
  121 IGEAGPIAVP EGAEITIAAD GTISALNPGD PANTVAPVGR LKLVKATGSE VQRGDDGIFR 180
  181 LSAETQATRG PVLQADPTLR VMSGVLEGSN VNAVAAMSDM IASARRFEMQ MKVISSVDDN 240
  241 AGRANQLLSM S

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	12.39794
Match:	1wlgA
Description:	Crystal structure of FlgE31, a major fragment of the hook protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.179743505749231	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: