YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGA_ECOLI
Organism:	Escherichia coli
Length:	219 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGA_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|77975730, gi\|... - gi\|77975730\|ref\|ZP_00831264.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia f...	211.0	[0..2]	[219..9]
gi\|238799103, gi... - gi\|77960291\|ref\|ZP_00824170.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia m...	208.0	[0..2]	[219..17]
gi\|77979940, gi\|... - gi\|77979940\|ref\|ZP_00835356.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia i...	206.0	[0..4]	[219..11]
gi\|238785501, gi... - gi\|77957056\|ref\|ZP_00821123.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia b...	205.0	[0..2]	[219..17]
gi\|108812487, gi... - gi\|108812487\|ref\|YP_648254.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis... gi\|108807169, gi... - gi\|108807169\|ref\|YP_651085.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis... gi\|145598614, gi... - gi\|145598614\|ref\|YP_001162690.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pes...	194.0	[0..2]	[219..34]
gi\|166210809, gi... - gi\|166210809\|ref\|ZP_02236844.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|166010841, gi... - gi\|166010841\|ref\|ZP_02231739.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|166961938, gi... - gi\|167420243\|ref\|ZP_02311996.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|167049407, gi... - gi\|167401018\|ref\|ZP_02306521.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|162352268, gi... - gi\|77636012\|ref\|ZP_00798090.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia p... gi\|167469716 - gi\|167469716\|ref\|ZP_02334420.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis F... gi\|167425844, gi... - gi\|167425844\|ref\|ZP_02317597.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|22126394, gi\|... - gi\|22126394\|ref\|NP_669817.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis ... gi\|45441413, gi\|... - gi\|45441413\|ref\|NP_992952.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pestis ... gi\|89105476, gi\|... - gi\|89105476\|ref\|ZP_01177995.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia p... gi\|165926043, gi... - gi\|165926043\|ref\|ZP_02221875.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b...	194.0	[0..2]	[219..37]
FLGA_YEREN - Flagella basal body P-ring formation protein FlgA OS=Yersinia enterocolitica GN=flgA PE=3 SV=1	193.0	[0..9]	[219..14]
gi\|117673903, gi... - gi\|77628870\|ref\|ZP_00791456.1\| COG1261: Flagellar basal body P-ring biosynthesis protein [Yersinia p...	193.0	[0..2]	[219..37]
gi\|51589289, gi\|... - gi\|51596007\|ref\|YP_070198.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pseudot... Q66BU6\|Q66BU6_YERPS - Flagella basal body P-ring formation protein FlgA precursor - Yersinia pseudotuberculosis	192.0	[0..2]	[219..15]
gi\|25323457 - pir\|\|AC0219 flagella basal body P-ring formation protein FlgA [imported] - Yersinia pestis (strain C... gi\|16122050, gi\|... - gi\|218928918\|ref\|YP_002346793.1\| flagellar basal body P-ring biosynthesis protein FlgA [Yersinia pes... gi\|149366255, gi... - gi\|149366255\|ref\|ZP_01888290.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis C... gi\|229897899, gi... - gi\|229897899\|ref\|ZP_04513050.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b... gi\|229902869, gi... - gi\|229902869\|ref\|ZP_04517986.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis N... gi\|229896238, gi... - gi\|229896238\|ref\|ZP_04511408.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis P... gi\|229693510, gi... - gi\|229897173\|ref\|ZP_04512329.1\| flagella basal body P-ring formation protein FlgA [Yersinia pestis b...	191.0	[0..2]	[219..15]

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Predicted Domain #1

Region A:
Residues: [1-81]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIIKRSVAI IAILFSPLST ASNLTSQLHN FFSAQLAGVS DEVRVSIRTA PNLLPPCEQP  60
   61 LLSMSNNSRL WGNVNVLARC G

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [82-219]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDKRYLQVNV QATGNYVVAA MPIARGGKLE AGNVKLKRGR LDTLPPRTVL DINQLVDAIS  60
   61 LRDLSPDQPI QLTQFRQAWR VKAGQRVNVI ASGDGFSANA EGQALNNAAV AQNARVRMVS 120
  121 GQVVSGVVDA DGNILINL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.76
Match:	1wvoA
Description:	Solution structure of RSGI RUH-029, an antifreeze protein like domain in human N-acetylneuraminic acid phosphate synthase gene.
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits