YRC Public Data Repository - Protein Structure Prediction

Protein:	FIC_ECOLI
Organism:	Escherichia coli
Length:	200 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIC_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|76675236 - gi\|76675236\|ref\|XP_582287.2\| PREDICTED: similar to Huntingtin interacting protein E [Bos taurus]	173.0	[0..6]	[198..373]
gi\|73995360 - gi\|73995360\|ref\|XP_543446.2\| PREDICTED: similar to Huntingtin interacting protein E [Canis familiari...	171.0	[0..6]	[198..372]
gi\|109098625 - gi\|109098625\|ref\|XP_001095158.1\| PREDICTED: similar to Huntingtin interacting protein E [Macaca mula...	169.0	[0..6]	[198..227]
FICD - FIC domain containing gi\|208968525 - gi\|208968525\|dbj\|BAG74101.1\| Huntingtin interacting protein E [synthetic construct]	168.0	[0..6]	[198..233]
gi\|50756484 - gi\|50756484\|ref\|XP_415180.1\| PREDICTED: similar to HYPE [Gallus gallus]	166.0	[0..6]	[198..225]
CE28722 - status:Confirmed UniProt:Q23544 protein_id:CAA93429.2	165.0	[0..6]	[199..273]
gi\|90578993, gi\|... - gi\|90578993\|ref\|ZP_01234803.1\| Cell filamentation protein Fic [Vibrio angustum S14], gi\|90439826\|gb\|...	165.0	[0..1]	[193..1]
gi\|37527376, gi\|... - gi\|37527376\|ref\|NP_930720.1\| cell filamentation protein Fic [Photorhabdus luminescens subsp. laumond...	165.0	[0..1]	[193..1]
gi\|77956649, gi\|... - gi\|77956649\|ref\|ZP_00820734.1\| COG2184: Protein involved in cell division [Yersinia bercovieri ATCC ...	163.0	[0..2]	[193..3]
gi\|66046949, gi\|... - gi\|66046949\|ref\|YP_236790.1\| filamentation induced by cAMP protein Fic [Pseudomonas syringae pv. syr...	163.0	[0..1]	[193..1]

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Predicted Domain #1

Region A:
Residues: [1-200]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDKFGEGRD PYLYPGLDIM RNRLNIRQQQ RLEQAAYEMT ALRAATIELG PLVRGLPHLR  60
   61 TIHRQLYQDI FDWAGQLREV DIYQGDTPFC HFAYIEKEGN ALMQDLEEEG YLVGLEKAKF 120
  121 VERLAHYYCE INVLHPFRVG SGLAQRIFFE QLAIHAGYQL SWQGIEKEAW NQANQSGAMG 180
  181 DLTALQMIFS KVVSEAGESE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.69897
Match:	2qc0A
Description:	No description for 2qc0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits