YRC Public Data Repository - Protein Structure Prediction

Protein:	FHUC_ECOLI
Organism:	Escherichia coli
Length:	265 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FHUC_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|196198805, gi... - gi\|196251865\|ref\|ZP_03150531.1\| sulfate ABC transporter, ATPase subunit [Clostridium thermocellum DS... gi\|48860137, gi\|... - gi\|67873780\|ref\|ZP_00503767.1\| ABC transporter [Clostridium thermocellum ATCC 27405], gi\|67851483\|gb...	324.0	[0..12]	[257..3]
CYSA_BACCR - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 /... gi\|228656892, gi... - gi\|229126503\|ref\|ZP_04255517.1\| Sulphate transport system permease protein 1 [Bacillus cereus BDRD-C...	323.0	[0..12]	[257..3]
gi\|113726386, gi... - gi\|150395538\|ref\|YP_001326005.1\| spermidine/putrescine ABC transporter ATPase subunit [Sinorhizobium...	322.0	[0..4]	[252..15]
gi\|91774964, gi\|... - gi\|91774964\|ref\|YP_544720.1\| sulphate transport system permease protein 1 [Methylobacillus flagellat...	322.0	[0..12]	[253..3]
gi\|89335149, gi\|... - gi\|89895701\|ref\|YP_519188.1\| hypothetical protein DSY2955 [Desulfitobacterium hafniense Y51], gi\|893...	322.0	[0..12]	[257..86]
gi\|48846061, gi\|... - gi\|78223110\|ref\|YP_384857.1\| sulphate transport system permease protein 1 [Geobacter metallireducens...	321.0	[0..12]	[264..3]
gi\|89205648, gi\|... - gi\|89205648\|ref\|ZP_01184216.1\| Sulphate transport system permease protein 1 [Bacillus weihenstephane...	321.0	[0..12]	[257..3]
gi\|110339573, gi... - gi\|110598816\|ref\|ZP_01387074.1\| Sulphate transport system permease protein 1 [Chlorobium ferrooxidan...	321.0	[0..12]	[257..3]
CYSA_BACC1 - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 10987 / NRS 248)...	321.0	[0..12]	[257..3]
gi\|15073645 - gi\|15073645\|emb\|CAC45287.1\| Probable putrescine transport ATP-binding protein [Sinorhizobium melilot... gi\|15964468 - gi\|15964468\|ref\|NP_384821.1\| putrescine ABC transporter ATP-binding protein [Sinorhizobium meliloti ...	321.0	[0..4]	[252..16]

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Predicted Domain #1

Region A:
Residues: [1-265]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEYTNHSDT TFALRNISFR VPGRTLLHPL SLTFPAGKVT GLIGHNGSGK STLLKMLGRH  60
   61 QPPSEGEILL DAQPLESWSS KAFARKVAYL PQQLPPAEGM TVRELVAIGR YPWHGALGRF 120
  121 GAADREKVEE AISLVGLKPL AHRLVDSLSG GERQRAWIAM LVAQDSRCLL LDEPTSALDI 180
  181 AHQVDVLSLV HRLSQERGLT VIAVLHDINM AARYCDYLVA LRGGEMIAQG TPAEIMRGET 240
  241 LEMIYGIPMG ILPHPAGAAP VSFVY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	82.69897
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits