YRC Public Data Repository - Protein Structure Prediction

Protein:	FEPC_ECOLI
Organism:	Escherichia coli
Length:	271 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FEPC_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|118430852, gi... - gi\|118430852\|ref\|NP_146917.2\| ABC transporter, ATP binding protein [Aeropyrum pernix K1], gi\|1160621...	325.0	[0..5]	[253..1]
SO4655 - sulfate ABC transporter ATP-binding protein CYSA2_SHEON - Sulfate/thiosulfate import ATP-binding protein CysA 2 OS=Shewanella oneidensis (strain MR-1) GN=cysA...	324.0	[0..8]	[271..3]
gi\|110339573, gi... - gi\|110598816\|ref\|ZP_01387074.1\| Sulphate transport system permease protein 1 [Chlorobium ferrooxidan...	324.0	[0..8]	[270..3]
CYSA_BACCR - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 /... gi\|228656892, gi... - gi\|229126503\|ref\|ZP_04255517.1\| Sulphate transport system permease protein 1 [Bacillus cereus BDRD-C...	324.0	[0..8]	[248..3]
gi\|89205648, gi\|... - gi\|89205648\|ref\|ZP_01184216.1\| Sulphate transport system permease protein 1 [Bacillus weihenstephane...	323.0	[0..8]	[248..3]
gi\|196198805, gi... - gi\|196251865\|ref\|ZP_03150531.1\| sulfate ABC transporter, ATPase subunit [Clostridium thermocellum DS... gi\|48860137, gi\|... - gi\|67873780\|ref\|ZP_00503767.1\| ABC transporter [Clostridium thermocellum ATCC 27405], gi\|67851483\|gb...	322.0	[0..8]	[264..3]
CYSA_BACC1 - Sulfate/thiosulfate import ATP-binding protein CysA OS=Bacillus cereus (strain ATCC 10987 / NRS 248)...	322.0	[0..8]	[248..3]
gi\|82721006, gi\|... - gi\|82741615\|ref\|ZP_00904332.1\| Sulphate transport system permease protein 1 [Shewanella sp. W3-18-1]... gi\|145563525, gi... - gi\|77815460\|ref\|ZP_00814690.1\| ABC transporter [Shewanella putrefaciens CN-32], gi\|77809565\|gb\|EAO93...	322.0	[0..8]	[271..3]
gi\|221236171, gi... - gi\|221236171\|ref\|YP_002518608.1\| spermidine/putrescine transport ATP-binding protein potA [Caulobact... gi\|25384753 - pir\|\|D87637 hypothetical protein CC3134 [imported] - Caulobacter crescentus gi\|16127364, gi\|... - gi\|16127364\|ref\|NP_421928.1\| spermidine/putrescine ABC transporter, ATP-binding protein [Caulobacter...	322.0	[0..1]	[248..8]

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Predicted Domain #1

Region A:
Residues: [1-271]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESVARLRG EQLTLGYGKY TVAENLTVEI PDGHFTAIIG PNGCGKSTLL RTLSRLMTPA  60
   61 HGHVWLDGEH IQHYASKEVA RRIGLLAQNA TTPGDITVQE LVARGRYPHQ PLFTRWRKED 120
  121 EEAVTKAMQA TGITHLADQS VDTLSGGQRQ RAWIAMVLAQ ETAIMLLDEP TTWLDISHQI 180
  181 DLLELLSELN REKGYTLAAV LHDLNQACRY ASHLIALREG KIVAQGAPKE IVTAELIERI 240
  241 YGLRCMIIDD PVAGTPLVVP LGRTAPSTAN S

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	86.39794
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits