YRC Public Data Repository - Protein Structure Prediction

Protein:	SO2851
Organism:	Shewanella oneidensis
Length:	187 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SO2851.

Description	E-value	Query Range	Subject Range
GMHBB_PASMU - D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase OS=Pasteurella multocida (strain Pm70)... GMHB_PASMU - D,D-heptose 1,7-bisphosphate phosphatase OS=Pasteurella multocida GN=gmhB PE=3 SV=1	156.0	[0..4]	[186..1]
gi\|113888536, gi... - gi\|78691733\|ref\|ZP_00856331.1\| Histidinol phosphatase-related protein:Histidinol-phosphate phosphata...	151.0	[0..1]	[183..1]
gi\|75428804, gi\|... - gi\|75428804\|ref\|ZP_00731919.1\| histidinol phosphatase and related phosphatases [Actinobacillus succi...	151.0	[0..4]	[185..1]
gi\|113969864, gi... - gi\|82498309\|ref\|ZP_00883813.1\| Histidinol phosphatase-related protein:Histidinol-phosphate phosphata...	150.0	[0..1]	[183..1]
gi\|78685930, gi\|... - gi\|78685930\|ref\|ZP_00850703.1\| Histidinol phosphatase-related protein:Histidinol-phosphate phosphata...	150.0	[0..1]	[183..1]
gi\|113461668, gi... - gi\|113461668\|ref\|YP_719737.1\| D,D-heptose 1,7-bisphosphate phosphatase [Haemophilus somnus 129PT], g...	150.0	[0..4]	[185..1]
gi\|32030676 - gi\|32030676\|ref\|ZP_00133476.1\| COG0241: Histidinol phosphatase and related phosphatases [Haemophilus...	149.0	[0..4]	[185..3]
gi\|126638580, gi... - gi\|78369087\|ref\|ZP_00839247.1\| Histidinol phosphatase-related protein:Histidinol-phosphate phosphata...	149.0	[0..4]	[185..1]
gi\|52306542, gi\|... - gi\|52424490\|ref\|YP_087627.1\| D,D-heptose 1,7-bisphosphate phosphatase [Mannheimia succiniciproducens...	148.0	[0..3]	[185..6]
gi\|229847523, gi... - gi\|229847523\|ref\|ZP_04467618.1\| D,D-heptose 1,7-bisphosphate phosphatase [Haemophilus influenzae 7P4... gi\|148715678, gi... - gi\|148825518\|ref\|YP_001290271.1\| D,D-heptose 1,7-bisphosphate phosphatase [Haemophilus influenzae Pi... gi\|42629112 - gi\|42629112\|ref\|ZP_00154661.1\| COG0241: Histidinol phosphatase and related phosphatases [Haemophilus...	147.0	[0..4]	[185..1]

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Predicted Domain #1

Region A:
Residues: [1-187]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTVNRAVFL DRDGVINKDH GYVHQVDDFE YIEGVFEACL ALKQQGYKLV VVTNQSGIAR  60
   61 GMYTEDQFHS LTEWMDWNFA DKGVDLDGIY YCPHHNEKGI GEYKVDCDCR KPKPGMLIDA 120
  121 AKFLKIDLSQ SVMVGDKTDD MLAAKAAGVP TRILVRTGKA IADESDASVV LDSIADVPAF 180
  181 LKNHKAS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.69897
Match:	2gmwA
Description:	No description for 2gmwA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.92340854382984	bayes_pls_golite062009
imidazoleglycerol-phosphate dehydratase activity	0.35884565083558	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: