YRC Public Data Repository - Protein Structure Prediction

Protein:	SO0933
Organism:	Shewanella oneidensis
Length:	355 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SO0933.

Description	E-value	Query Range	Subject Range
gi\|114048737, gi... - gi\|78688837\|ref\|ZP_00853504.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase... gi\|117614120, gi... - gi\|78684629\|ref\|ZP_00849412.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase... gi\|113883804, gi... - gi\|82495123\|ref\|ZP_00880701.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase...	514.0	[0..1]	[355..1]
gi\|145563669, gi... - gi\|77813077\|ref\|ZP_00812358.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase... gi\|124545705, gi... - gi\|124545705\|ref\|ZP_01704880.1\| fructose-bisphosphate aldolase, class II, Calvin cycle subtype [Shew... gi\|120600092, gi... - gi\|82740539\|ref\|ZP_00903278.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase...	513.0	[0..1]	[355..1]
gi\|111618272, gi... - gi\|111618272\|ref\|ZP_01405296.1\| ketose-bisphosphate aldolases:Fructose-bisphosphate aldolase, class ...	510.0	[0..1]	[354..625]
gi\|126169159, gi... - gi\|84318903\|ref\|ZP_00967320.1\| COG0191: Fructose/tagatose bisphosphate aldolase [Pseudomonas aerugin... gi\|126197025, gi... - gi\|84324169\|ref\|ZP_00972232.1\| COG0191: Fructose/tagatose bisphosphate aldolase [Pseudomonas aerugin... gi\|107099542 - gi\|107099542\|ref\|ZP_01363460.1\| hypothetical protein PaerPA_01000554 [Pseudomonas aeruginosa PACS2] ALF_PSEAE - Fructose-bisphosphate aldolase OS=Pseudomonas aeruginosa GN=fba PE=3 SV=1 gi\|116054282, gi... - gi\|32043751\|ref\|ZP_00141013.1\| COG0191: Fructose/tagatose bisphosphate aldolase [Pseudomonas aerugin... gi\|218769520, gi... - gi\|218889297\|ref\|YP_002438161.1\| fructose-1,6-bisphosphate aldolase [Pseudomonas aeruginosa LESB58],... ALF_PSEAE - Fructose-bisphosphate aldolase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / ...	506.0	[0..1]	[354..1]
gi\|119768388, gi... - gi\|68545549\|ref\|ZP_00585099.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase...	505.0	[0..1]	[355..1]
gi\|150959694, gi... - gi\|94413820\|ref\|ZP_01293695.1\| hypothetical protein PaerP_01004337 [Pseudomonas aeruginosa PA7], gi\|...	505.0	[0..1]	[354..1]
tr\|F3G922\|F3G922... - Fructose-1,6-bisphosphate aldolase OS=Pseudomonas syringae pv. pisi str. 1704B GN=PSYPI_14768 PE=3 S... gi\|23471428, gi\|... - gi\|66048011\|ref\|YP_237852.1\| fructose-1,6-bisphosphate aldolase [Pseudomonas syringae pv. syringae B...	504.0	[0..1]	[354..1]
gi\|67157473, gi\|... - gi\|67157473\|ref\|ZP_00418722.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase... gi\|67157473 - gi\|67157473\|ref\|ZP_00418722.1\| Ketose-bisphosphate aldolase, class-II:Fructose-bisphosphate aldolase...	504.0	[0..1]	[354..1]
gi\|71733486, gi\|... - gi\|71733486\|ref\|YP_276914.1\| fructose-1,6-bisphosphate aldolase [Pseudomonas syringae pv. phaseolico...	503.0	[0..1]	[354..1]
ALF_PSEST - Fructose-bisphosphate aldolase OS=Pseudomonas stutzeri GN=fba PE=3 SV=1	503.0	[0..1]	[354..1]

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Predicted Domain #1

Region A:
Residues: [1-355]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALISLRQLL DHAAEHGYGV PAFNVNNLEQ MRAIMQAAEA TDSPVIVQAS AGARKYARPQ  60
   61 FLKYLMTAAL EQYPDIPVCI HQDHGTDPDI CQRSIQLGMS SVMMDGSLMA DGKTPASYEY 120
  121 NVDVTRRTVA FAHACGVSVE GEIGCLGSLE TGTAGEEDGV GAEGVLSHDQ LLTSPEEAAR 180
  181 FVADTHVDAL AIAIGTSHGA YKFSRKPTGD VLRIDRIKEI HARIPNTHLV MHGSSSVPQE 240
  241 WLKIINQYGG QIPETYGVPL EEIVEGIKHG VRKVNIDTDL RLASTGAVRK YLAEHPSEFD 300
  301 PRKFLKASME AMADICTVRY EAFGCAGQAS KIKPLSLQAM YKAYQSGALD PKINL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	107.0
Match:	2isvA
Description:	No description for 2isvA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits