YRC Public Data Repository - Protein Structure Prediction

Protein:	EUTH_ECOLI
Organism:	Escherichia coli
Length:	408 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EUTH_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|254162426, gi... - gi\|254162426\|ref\|YP_003045534.1\| predicted inner membrane protein [Escherichia coli B str. REL606], ... gi\|253772658, gi... - gi\|254289187\|ref\|YP_003054935.1\| predicted inner membrane protein [Escherichia coli BL21(DE3)], gi\|2... gi\|83586900, gi\|... - gi\|83586900\|ref\|ZP_00925531.1\| COG3192: Ethanolamine utilization protein [Escherichia coli 101-1], g... gi\|251785778, gi... - gi\|251785778\|ref\|YP_003000082.1\| hypothetical protein B21_02305 [Escherichia coli BL21], gi\|24237805...	511.0	[0..1]	[408..1]
gi\|191167659, gi... - gi\|75229226\|ref\|ZP_00715794.1\| COG3192: Ethanolamine utilization protein [Escherichia coli B7A], gi\|...	511.0	[0..1]	[408..1]
gi\|191172907, gi... - gi\|75240101\|ref\|ZP_00724060.1\| COG3192: Ethanolamine utilization protein [Escherichia coli F11], gi\|... gi\|218370894, gi... - gi\|218700908\|ref\|YP_002408537.1\| putative ethanolamine transporter [Escherichia coli IAI39], gi\|2183... gi\|110344216, gi... - gi\|110642624\|ref\|YP_670354.1\| ethanolamine utilization protein EutH [Escherichia coli 536], gi\|11034...	509.0	[0..1]	[408..1]
gi\|74312977, gi\|... - gi\|74312977\|ref\|YP_311396.1\| EutH [Shigella sonnei Ss046], gi\|73856454\|gb\|AAZ89161.1\| EutH [Shigella...	508.0	[0..1]	[408..1]
EUTH_SALTY - Ethanolamine utilization protein EutH OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720... lcl\|NC_016856.1_... - [gene=eutH] [protein=putative transport protein] [protein_id=YP_005238546.1] [location=complement(26... EUTH_SALTY - Ethanolamine utilization protein eutH OS=Salmonella typhimurium GN=eutH PE=3 SV=3 gi\|205349449, gi... - gi\|205349449\|gb\|EDZ36080.1\| ethanolamine utilization protein EutH [Salmonella enterica subsp. enteri... gi\|167991758, gi... - gi\|205329910\|gb\|EDZ16674.1\| ethanolamine utilization protein EutH [Salmonella enterica subsp. enteri... gi\|167549528, gi... - gi\|205325264\|gb\|EDZ13103.1\| ethanolamine utilization protein EutH [Salmonella enterica subsp. enteri... gi\|161362158, gi... - gi\|161612794\|ref\|YP_001586759.1\| hypothetical protein SPAB_00493 [Salmonella enterica subsp. enteric... EUTH_SALTY - Ethanolamine utilization protein eutH OS=Salmonella typhimurium GN=eutH PE=3 SV=3 gi\|204929504, gi... - gi\|204929504\|ref\|ZP_03220578.1\| ethanolamine utilization protein EutH [Salmonella enterica subsp. en... gi\|168817792, gi... - gi\|205344748\|gb\|EDZ31512.1\| ethanolamine utilization protein EutH [Salmonella enterica subsp. enteri...	506.0	[0..1]	[408..1]
gi\|194432073, gi... - gi\|83570666\|ref\|ZP_00922109.1\| COG3192: Ethanolamine utilization protein [Shigella dysenteriae 1012]...	506.0	[0..1]	[408..1]
gi\|56412656, gi\|... - gi\|56412656\|ref\|YP_149731.1\| hypothetical protein SPA0408 [Salmonella enterica subsp. enterica serov... gi\|197361591, gi... - gi\|197361591\|ref\|YP_002141227.1\| hypothetical protein SSPA0382 [Salmonella enterica subsp. enterica ...	505.0	[0..1]	[408..1]
gi\|224583006, gi... - gi\|224583006\|ref\|YP_002636804.1\| hypothetical protein SPC_1199 [Salmonella enterica subsp. enterica ... gi\|207857872, gi... - gi\|207857872\|ref\|YP_002244523.1\| hypothetical protein SEN2440 [Salmonella enterica subsp. enterica s... gi\|205353565, gi... - gi\|205353565\|ref\|YP_002227366.1\| hypothetical protein SG2491 [Salmonella enterica subsp. enterica se... gi\|62128659, gi\|... - gi\|62181026\|ref\|YP_217443.1\| hypothetical protein SC2456 [Salmonella enterica subsp. enterica serova...	503.0	[0..1]	[408..1]
gi\|25357709, gi\|... - gi\|25357709\|pir\|\|AI0813 probable membrane protein STY2697 [imported] - Salmonella enterica subsp. en... gi\|29136550, gi\|... - gi\|29140925\|ref\|NP_804267.1\| hypothetical protein t0398 [Salmonella enterica subsp. enterica serovar... gi\|213646837 - gi\|213646837\|ref\|ZP_03376890.1\| hypothetical protein SentesTy_05720 [Salmonella enterica subsp. ente... gi\|16761378 - gi\|16761378\|ref\|NP_456995.1\| hypothetical protein STY2697 [Salmonella enterica subsp. enterica serov...	502.0	[0..1]	[408..1]
gi\|115513772, gi... - gi\|117624648\|ref\|YP_853561.1\| putative ethanolamine utilization transport protein EutH [Escherichia ... gi\|226901332, gi... - gi\|237704966\|ref\|ZP_04535447.1\| ethanolamine utilization transporter EutH [Escherichia sp. 3_2_53FAA... gi\|218366157, gi... - gi\|218559388\|ref\|YP_002392301.1\| putative ethanolamine transporter [Escherichia coli S88], gi\|218366... gi\|91211781, gi\|... - gi\|91211781\|ref\|YP_541767.1\| ethanolamine utilization transport protein EutH [Escherichia coli UTI89...	495.0	[0..1]	[396..1]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGINEIIMYI MMFFMLIAAV DRILSQFGGS ARFLGKFGKS IEGSGGQFEE GFMAMGALGL  60
   61 AMVGMTALAP VLAHVLGPVI IPVYEMLGAN PSMFAGTLLA CDMGGFFLAK ELAG

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [115-263]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDVAAWLYSG LILGSMMGPT IVFSIPVALG IIEPSDRRYL ALGVLAGIVT IPIGCIAGGL  60
   61 VAMYSGVQIN GQPVEFTFAL ILMNMIPVII VAILVALGLK FIPEKMINGF QIFAKFLVAL 120
  121 ITLGLAAAVV KFLLGWELIP GLDPIFMAP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [264-408]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDKPGEVMRA IEVIGSISCV LLGAYPMVLL LTRWFEKPLM SVGKVLNMNN IAAAGMVATL  60
   61 ANNIPMFGMM KQMDTRGKVI NCAFAVSAAF ALGDHLGFAA ANMNAMIFPM IVGKLIGGVT 120
  121 AIGVAMMLVP KEDATATKTE AEAQS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits