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View Structure Prediction Details

Protein: EFP_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EFP_PHOLL.

Description E-value Query
Range
Subject
Range
gi|62130416, gi|... - gi|62182783|ref|YP_219200.1| elongation factor P [Salmonella enterica subsp. enterica serovar Choler...
278.0 [0..1] [188..81]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATYSTNEFR SGLKIMLDGE PCAILESEFV KPGKGQAFAR VRIRKLISGK LLEKTFKSTD  60
   61 SVESADVMDM NLTYLYNDGE FWHFMNNETF EQLAADEKAV GDNAKWLVEQ AECILTLWNG 120
  121 QPISVTPPNF VELEITDTDP GLKGDTAGTG GKPATLNTGA VVKVPLFVQI GEVIKVDTRS 180
  181 GEYVSRVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 1ybyA
Description: Conserved hypothetical protein Cth-95 from Clostridium thermocellum
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle