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View Structure Prediction Details

Protein: ECLH_MANSE
Organism: Manduca sexta
Length: 88 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECLH_MANSE.

Description E-value Query
Range
Subject
Range
gi|55979134 - gi|55979134|gb|AAV69026.1| eclosion hormone precursor [Helicoverpa armigera]
132.0 [0..1] [88..1]
AGAP010437-PA - ECH: eclosion hormone|protein_coding|3L:3546075:3546412:-1|gene:AGAP010437
gi|118781508, gi... - gi|118781508|ref|XP_001230805.1| eclosion hormone (AGAP010437-PA) [Anopheles gambiae str. PEST], gi|...
122.0 [0..1] [88..1]
gi|108872486, gi... - gi|157128758|ref|XP_001661508.1| eclosion hormone, putative [Aedes aegypti], gi|108872486|gb|EAT3671...
120.0 [0..4] [88..5]
ECLH_BOMMO - Eclosion hormone OS=Bombyx mori PE=1 SV=2
117.0 [0..1] [88..1]
gi|110295235 - gi|110295235|gb|ABG66962.1| eclosion hormone precursor [Ostrinia furnacalis]
115.0 [0..1] [88..1]
gi|208239 - gi|208239|gb|AAA72999.1| eclosion hormone
104.0 [0..24] [88..15]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKVTVAFF MFAMIAFLAN FGYVECNPAI ATGYDPMEIC IENCAQCKKM LGAWFEGPLC  60
   61 AESCIKFKGK LIPECEDFAS IAPFLNKL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 43.958607
Match: PF04736.3
Description: No description for PF04736.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.518 0.464 neuropeptide signaling pathway a.4.5 "Winged helix" DNA-binding domain
View Download 0.687 0.074 neuropeptide signaling pathway a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.607 0.038 neuropeptide signaling pathway a.16.1 S15/NS1 RNA-binding domain
View Download 0.566 0.020 neuropeptide signaling pathway a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.556 N/A N/A a.60.6 DNA polymerase beta, N-terminal domain-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle