YRC Public Data Repository - Protein Structure Prediction

Protein:	EAEH_ECOLI
Organism:	Escherichia coli
Length:	295 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EAEH_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|71979957 - gi\|71979957\|gb\|AAZ57201.1\| EaeH [Escherichia coli]	406.0	[0..1]	[293..1]
gi\|117622577, gi... - gi\|117622577\|ref\|YP_851490.1\| attaching and effacing protein, pathogenesis factor EaeH [Escherichia ... gi\|91209367, gi\|... - gi\|91209367\|ref\|YP_539353.1\| attaching and effacing protein, pathogenesis factor [Escherichia coli U... gi\|218557219, gi... - gi\|218557219\|ref\|YP_002390132.1\| putative adhesin [Escherichia coli S88], gi\|218363988\|emb\|CAR01653....	401.0	[0..1]	[293..1]
gi\|26106711, gi\|... - gi\|26246313\|ref\|NP_752352.1\| putative adhesin [Escherichia coli CFT073], gi\|26106711\|gb\|AAN78896.1\|A...	401.0	[0..1]	[293..1]
gi\|25497745, gi\|... - pir\|\|D85521 probable adhesin eaeH [imported] - Escherichia coli (strain O157:H7, substrain EDL933),... gi\|15800012, gi\|... - gi\|15800012\|ref\|NP_286024.1\| putative adhesin [Escherichia coli O157:H7 EDL933], gi\|12513096\|gb\|AAG5... gi\|13359793, gi\|... - gi\|15829590\|ref\|NP_308363.1\| putative invasin [Escherichia coli O157:H7], gi\|13359793\|dbj\|BAB33759.1... gi\|13359793, gi\|... - gi\|15829590\|ref\|NP_308363.1\| putative invasin [Escherichia coli O157:H7 str. Sakai], gi\|13359793\|dbj...	400.0	[0..1]	[293..1]
gi\|75194520, gi\|... - gi\|75194520\|ref\|ZP_00704590.1\| COG5295: Autotransporter adhesin [Escherichia coli HS], gi\|157159804\|...	400.0	[0..1]	[293..1]
gi\|110640572, gi... - gi\|110640572\|ref\|YP_668300.1\| putative adhesin/invasin [Escherichia coli 536], gi\|110342164\|gb\|ABG68...	399.0	[0..1]	[293..1]
gi\|25391003 - gi\|25391003\|pir\|\|G90975 probable factor [imported] - Escherichia coli (strain O157:H7, substrain RIM... gi\|13362243, gi\|... - gi\|15832029\|ref\|NP_310802.1\| hypothetical protein ECs2775 [Escherichia coli O157:H7], gi\|13362243\|db... gi\|13362243, gi\|... - gi\|15832029\|ref\|NP_310802.1\| hypothetical protein ECs2775 [Escherichia coli O157:H7 str. Sakai], gi\|...	351.0	[0..16]	[293..86]
YEEJ_ECO57 - Uncharacterized protein YeeJ OS=Escherichia coli O157:H7 GN=Z3135 PE=3 SV=2	351.0	[0..16]	[293..77]

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Predicted Domain #1

Region A:
Residues: [1-86]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHYKTGHKQ PRFRYSVLAR CVAWANISVQ VLFPLAVTFT PVMAARAQHA VQPRLSMGNT  60
   61 TVTADNNVEK NVASFAANAG TFLSSQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [87-295]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDSDATRNFI TGMATAKANQ EIQEWLGKYG TARVKLNVDK DFSLKDSSLE MLYPIYDTPT  60
   61 NMLFTQGAIH RTDDRTQSNI GFGWRHFSGN DWMAGVNTFI DHDLSRSHTR IGVGAEYWRD 120
  121 YLKLSANGYI RASGWKKSPD IEDYQERPAN GWDIRAEGYL PAWPQLGASL MYEQYYGDEV 180
  181 GLFGKDKRQK DPHAISAEVT YTPVPLTQQ

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.0
Match:	1ormA
Description:	Outer membrane protein X (OMPX)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits